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HEV - High Energy Ventilator
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GNU GENERAL PUBLIC LICENSE
Version 3, 29 June 2007
Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/>
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LICENSE deleted 100644 → 0
View file @ 302a5fef
MIT License
Copyright (c) 2020 HEV Collaboration, CERN
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
copies of the Software, and to permit persons to whom the Software is
furnished to do so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
ansible/hev-ansible.sh
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
ansible_home=`pwd`/playbooks
export ANSIBLE_CONFIG=$ansible_home/ansible.cfg
export ANSIBLE_INVENTORY=$ansible_home/hosts
export ANSIBLE_LIBRARY=$ansible_home
......
ansible/playbooks/apache.yml
View file @ 459c7229
---
- hosts: hevpi1
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
- hosts: hevpi
remote_user: pi
vars:
download_dir: /home/pi/Downloads
......
ansible/playbooks/arduino_suite.sh
View file @ 459c7229
#!/bin/bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
download_dir=/home/pi/Downloads/
......
ansible/playbooks/bigmouse.yml
View file @ 459c7229
---
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
- hosts: hevpi
remote_user: pi
vars:
......
ansible/playbooks/firstboot.sh
View file @ 459c7229
#!/bin/bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
sudo raspi-config nonint do_hostname hevpi
sudo raspi-config nonint do_overscan 1
......
ansible/playbooks/firstboot.yml
View file @ 459c7229
---
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
- hosts: hevpi
remote_user: pi
vars:
......
ansible/playbooks/hev-display-opengl.sh
View file @ 459c7229
#!/bin/bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
download_dir=/home/pi/Downloads
dev_dir=/home/pi/Development
......
ansible/playbooks/hev-display.sh
View file @ 459c7229
#!/bin/bash
wget -qO - https://hev-sw.gitlab.io/public.key | sudo apt-key add - && echo deb https://hev-sw.gitlab.io/wip/deb/raspbian/ buster main | sudo tee /etc/apt/sources.list.d/hev-sw.list
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
ansible/playbooks/install_hevdisplay_opengl.yml
View file @ 459c7229
---
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
- hosts: cernpi
remote_user: pi
vars:
......
ansible/playbooks/install_software.yml
View file @ 459c7229
---
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
- hosts: hevpi
remote_user: pi
vars:
......
ansible/playbooks/lists.yml
View file @ 459c7229
rpi_swlist:
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
- vim
- cowsay
- openssh-server
......
ansible/playbooks/platform-io.sh
View file @ 459c7229
#!/bin/bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
curl -fsSL https://raw.githubusercontent.com/platformio/platformio-core-installer/master/get-platformio.py -o get-platformio.py
python3 get-platformio.py
......
ansible/playbooks/refresh_hevdisplay.yml
View file @ 459c7229
---
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
- hosts: allpi
remote_user: pi
vars:
......
ansible/playbooks/refresh_software.yml
View file @ 459c7229
---
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
- hosts: hevpi
remote_user: pi
vars:
......
ansible/playbooks/setup_apache.sh
View file @ 459c7229
#!/bin/bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
a2dismod wsgi
a2enmod wsgi
#update the locations in hev.conf if needed
......
ansible/playbooks/setup_arduino.sh
View file @ 459c7229
#!/bin/bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
sketch=Multiloop_skeleton
......
ansible/playbooks/setup_arduino.yml
View file @ 459c7229
- hosts: hevpi
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
vars:
download_dir: /home/pi/Downloads
......
arduino/ADC_and_valves_control/Arduino_ADC_output_for_relay.ino deleted 100644 → 0
View file @ 302a5fef
int Sentor_P0 = A0;
void setup() {
// put your setup code here, to run once:
pinMode(2, OUTPUT);
pinMode(13, INPUT);
Serial.begin(9600);
}
void loop() {
// put your main code here, to run repeatedly:
digitalWrite(2, HIGH); // sets the digital pin 13 on
int P0 = analogRead(Sentor_P0);
delay(1000); // waits for a second
digitalWrite(2, LOW); // sets the digital pin 13 off
//Serial.print("P0");
Serial.println((String)+P0+",2000,");
/* Serial.println("1234");
Serial.println(P2);
Serial.println(P3);
Serial.println(P4);
(String)"x:"+x+" y:"+y
*/
;
// Serial.print("\n");
delay(1000);
}
arduino/ADC_and_valves_control/Python_read_ADC/test.py deleted 100644 → 0
View file @ 302a5fef
import serial
import matplotlib.pyplot as plt
from drawnow import *
import atexit
P0 = []
P1 = []
x = []
plt.ion()
cnt=0
serialArduino = serial.Serial('/dev/ttyUSB0', 9600)
def plotValues():
plt.title('Serial value from Arduino')
plt.grid(True)
plt.ylabel('Pressure')
plt.plot(P0, 'rx-', label='P0')
plt.plot(P1, 'bx-', label='P1')
plt.legend(loc='upper right')
def doAtExit():
serialArduino.close()
print("Close serial")
print("serialArduino.isOpen() = " + str(serialArduino.isOpen()))
atexit.register(doAtExit)
print("serialArduino.isOpen() = " + str(serialArduino.isOpen()))
#pre-load dummy data
for i in range(0,26):
P0.append(0)
P1.append(0)
while True:
while (serialArduino.inWaiting()==0):
pass
print("readline()")
valueRead = serialArduino.readline()
print(valueRead)
#valueInInt = int(valueRead)
# x = valueRead.split()
# print(valueRead[1])
Pressure0 = valueRead.decode().split(",")[0]
print(Pressure0)
Pressure1 = valueRead.decode().split(",")[1]
print(Pressure1)
#check if valid value can be casted
try:
valueInInt = int(Pressure0)
valueInInt1 = int(Pressure1)
print(valueInInt)
if valueInInt <= 1024:
P0.append(valueInInt)
P0.pop(0)
P1.append(valueInInt1)
P1.pop(0)
drawnow(plotValues)
else:
print("Invalid! too large")
except ValueError:
print("Invalid! cannot cast")
arduino/ADC_and_valves_control/Python_read_ADC/test2.py deleted 100644 → 0
View file @ 302a5fef
"""
ldr.py
Display analog data from Arduino using Python (matplotlib)
Author: Mahesh Venkitachalam
Website: electronut.in
"""
import sys, serial, argparse
import numpy as np
from time import sleep
from collections import deque
import matplotlib.pyplot as plt
import matplotlib.animation as animation
# plot class
class AnalogPlot:
# constr
def __init__(self, strPort, maxLen):
# open serial port
self.ser = serial.Serial(strPort, 9600)
self.ax = deque([0.0]*maxLen)
self.ay = deque([0.0]*maxLen)
self.maxLen = maxLen
# add to buffer
def addToBuf(self, buf, val):
if len(buf) < self.maxLen:
buf.append(val)
else:
buf.pop()
buf.appendleft(val)
# add data
def add(self, data):
assert(len(data) == 2)
self.addToBuf(self.ax, data[0])
self.addToBuf(self.ay, data[1])
# update plot
def update(self, frameNum, a0, a1):
try:
line = self.ser.readline()
data = [float(val) for val in line.split()]
# print data
if(len(data) == 2):
self.add(data)
a0.set_data(range(self.maxLen), self.ax)
a1.set_data(range(self.maxLen), self.ay)
except KeyboardInterrupt:
print('exiting')
return a0,
# clean up
def close(self):
# close serial
self.ser.flush()
self.ser.close()
# main() function
def main():
# create parser
parser = argparse.ArgumentParser(description="LDR serial")
# add expected arguments
parser.add_argument('--port', dest='port', required=True)
# parse args
args = parser.parse_args()
#strPort = '/dev/tty.usbserial-A7006Yqh'
strPort = args.port
print('reading from serial port %s...' % strPort)
# plot parameters
analogPlot = AnalogPlot(strPort, 100)
print('plotting data...')
# set up animation
fig = plt.figure()
ax = plt.axes(xlim=(0, 100), ylim=(0, 1023))
a0, = ax.plot([], [])
a1, = ax.plot([], [])
anim = animation.FuncAnimation(fig, analogPlot.update,
fargs=(a0, a1),
interval=50)
# show plot
plt.show()
# clean up
analogPlot.close()
print('exiting.')
# call main
if __name__ == '__main__':
main()
arduino/Multiloop_skeleton/Multiloop_skeleton.ino deleted 100644 → 0
View file @ 302a5fef
// Multi-loops skeleton
// Description: Shows 3 loops operating in "parallel" reading/writing a global variable
// Karol Hennessy
// 2020-03-29
#include <VariableTimedAction.h>
// global variables
static int globalcnt = 0;
class SafetyAlarmLoop : public VariableTimedAction
{
private:
int cnt = 0;
unsigned long run()
{
cnt++;
Serial.println("SA "+ String(globalcnt));
return 0;
}
public:
int getCnt()
{
return cnt;
}
} safetyalarmloop ;
class BreathingLoop : public VariableTimedAction
{
private:
int cnt = 0;
unsigned long run()
{
cnt++;
Serial.println("BR "+ String(cnt));
return 0;
}
public:
int getCnt()
{
return cnt;
}
} breathingloop;
class UILoop : public VariableTimedAction
{
private:
//int cnt = 0;
unsigned long run()
{
globalcnt++;
Serial.println("UI "+ String(globalcnt));
return 0;
}
public:
/* int getCnt()
{
return cnt;
}*/
} uiloop;
void setup() {
Serial.begin(9600);
// note - order is not guaranteed if they all run on the same "cycle"
safetyalarmloop.start(1000);
//breathingloop.start(500);
uiloop.start(1000);
}
void loop() {
// put your main code here, to run repeatedly:
VariableTimedAction::updateActions();
}
arduino/Multiloop_skeleton_pio/platformio.ini deleted 100644 → 0
View file @ 302a5fef
[env:uno]
platform = atmelavr
framework = arduino
board = uno
[env:mkrwifi1010]
platform = atmelsam
framework = arduino
board = mkrwifi1010
[env:mkrvidor4000]
platform = atmelsam
framework = arduino
board = mkrvidor4000
[env:featheresp32]
platform = espressif32
framework = arduino
board = featheresp32
[env:nodemcu-32s]
platform = espressif32
framework = arduino
board = nodemcu-32s
arduino/Multiloop_skeleton_pio/src/Multiloop_skeleton.ino deleted 100644 → 0
View file @ 302a5fef
// Multi-loops skeleton
// Description: Shows 3 loops operating in "parallel" reading/writing a global variable
// Karol Hennessy
// 2020-03-29
#include <VariableTimedAction.h>
// global variables
static int globalcnt = 0;
class SafetyAlarmLoop : public VariableTimedAction
{
private:
int cnt = 0;
unsigned long run()
{
cnt++;
Serial.println("SA "+ String(globalcnt));
return 0;
}
public:
int getCnt()
{
return cnt;
}
} safetyalarmloop ;
class BreathingLoop : public VariableTimedAction
{
private:
int cnt = 0;
unsigned long run()
{
cnt++;
Serial.println("BR "+ String(cnt));
return 0;
}
public:
int getCnt()
{
return cnt;
}
} breathingloop;
class UILoop : public VariableTimedAction
{
private:
//int cnt = 0;
unsigned long run()
{
globalcnt++;
Serial.println("UI "+ String(globalcnt));
return 0;
}
public:
/* int getCnt()
{
return cnt;
}*/
} uiloop;
void setup() {
Serial.begin(9600);
// note - order is not guaranteed if they all run on the same "cycle"
safetyalarmloop.start(1000);
//breathingloop.start(500);
uiloop.start(1000);
}
void loop() {
// put your main code here, to run repeatedly:
VariableTimedAction::updateActions();
}
arduino/TFT/TFT.ino deleted 100644 → 0
View file @ 302a5fef
#include <LiquidCrystal.h>
//Arduino pins
const int rs = 7, en = 8, d4 = 9, d5 = 10, d6 = 11, d7 = 12;
LiquidCrystal lcd(rs, en, d4, d5, d6, d7);
void setup() {
lcd.begin(16, 2); // Declare number of columns and rows
Serial.begin(9600);
}
void loop() {
// This code shows on the LCD the characters received over serial port
if (Serial.available()) {
delay(1000);
lcd.clear();
while (Serial.available() > 0) {
lcd.write(Serial.read());
}
}
}
arduino/basic_io/.gitignore deleted 100644 → 0
View file @ 302a5fef
.pio
.vscode/.browse.c_cpp.db*
.vscode/c_cpp_properties.json
.vscode/launch.json
.vscode/ipch
arduino/basic_io/include/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project header files.
A header file is a file containing C declarations and macro definitions
to be shared between several project source files. You request the use of a
header file in your project source file (C, C++, etc) located in `src` folder
by including it, with the C preprocessing directive `#include'.
```src/main.c
#include "header.h"
int main (void)
{
...
}
```
Including a header file produces the same results as copying the header file
into each source file that needs it. Such copying would be time-consuming
and error-prone. With a header file, the related declarations appear
in only one place. If they need to be changed, they can be changed in one
place, and programs that include the header file will automatically use the
new version when next recompiled. The header file eliminates the labor of
finding and changing all the copies as well as the risk that a failure to
find one copy will result in inconsistencies within a program.
In C, the usual convention is to give header files names that end with `.h'.
It is most portable to use only letters, digits, dashes, and underscores in
header file names, and at most one dot.
Read more about using header files in official GCC documentation:
* Include Syntax
* Include Operation
* Once-Only Headers
* Computed Includes
https://gcc.gnu.org/onlinedocs/cpp/Header-Files.html
arduino/basic_io/lib/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project specific (private) libraries.
PlatformIO will compile them to static libraries and link into executable file.
The source code of each library should be placed in a an own separate directory
("lib/your_library_name/[here are source files]").
For example, see a structure of the following two libraries `Foo` and `Bar`:
|--lib
| |
| |--Bar
| | |--docs
| | |--examples
| | |--src
| | |- Bar.c
| | |- Bar.h
| | |- library.json (optional, custom build options, etc) https://docs.platformio.org/page/librarymanager/config.html
| |
| |--Foo
| | |- Foo.c
| | |- Foo.h
| |
| |- README --> THIS FILE
|
|- platformio.ini
|--src
|- main.c
and a contents of `src/main.c`:
```
#include <Foo.h>
#include <Bar.h>
int main (void)
{
...
}
```
PlatformIO Library Dependency Finder will find automatically dependent
libraries scanning project source files.
More information about PlatformIO Library Dependency Finder
- https://docs.platformio.org/page/librarymanager/ldf.html
arduino/basic_io/platformio.ini deleted 100644 → 0
View file @ 302a5fef
; PlatformIO Project Configuration File
;
; Build options: build flags, source filter
; Upload options: custom upload port, speed and extra flags
; Library options: dependencies, extra library storages
; Advanced options: extra scripting
;
; Please visit documentation for the other options and examples
; https://docs.platformio.org/page/projectconf.html
[env]
lib_deps =
5574 ; INA2xx
820 ; Adafruit mcp9808
[env:nodemcu-32s]
platform = espressif32
board = nodemcu-32s
framework = arduino
arduino/basic_io/src/johan.cpp deleted 100644 → 0
View file @ 302a5fef
#include <Arduino.h>
#include <Wire.h>
#include <SPI.h>
#include "Adafruit_MCP9808.h"
#include <INA.h>
#define DEBUG
#ifdef DEBUG
#define DEBUG_SERIAL(x) Serial.begin (x)
#define DEBUG_PRINT(x) Serial.print (x)
#define DEBUG_PRINTLN(x) Serial.println (x)
#define DEBUG_PRINT2(x,y) Serial.print (x,y)
#define DEBUG_PRINTLN2(x,y) Serial.println (x,y)
#else
#define DEBUG_SERIAL(x)
#define DEBUG_PRINT(x)
#define DEBUG_PRINTLN(x)
#define DEBUG_PRINT2(x,y)
#define DEBUG_PRINTLN2(x,y)
#endif
//Flag to close all valves of the system to stop the data taking in a safe state
bool stop = true;
// Create the MCP9808 temperature sensor object
Adafruit_MCP9808 tempsensor = Adafruit_MCP9808();
// Set Board to "ESP32 Dev Module"
// Set Port to /dev/ttyUSB0 on Linux
const int freq = 500; // 900 Hz for burkert 2875; Note - could be 500 Hz; depending on valve
float duty_cycle = 0.0;
const float max_duty_cycle = 0.85;
//const int pin_valve_air_in = 3; // RX0
const int pin_valve_o2_in = 5; // STRAPPING PIN (prefer as output / high-Z)
const int pin_valve_inhale = 21; // formerly valve_out
const int pin_valve_exhale = 19; // formerly valve_scavenge
const int pin_valve_purge = 18;
//const int pin_valve_atmosphere = 12; // A15 // STRAPPING PIN (prefer as output / high-Z)
const int pin_valve_air_in = 25; // DAC0
const int redled = 12; // red led on J28
const int yellowled = 16;
const int greenled = 17;
const int buzzer = 2;
const int p_patient = 32; // red led on J28
const int p_buffer = 34; //
const int p_air_supply = 36; //
const int p_air_regulated = 39; //
const int p_inhale = 35; //
const int p_o2_supply = 27; //
const int p_o2_regulated = 14; //
uint8_t devicesFound = 0; ///< Number of INAs found
INA_Class INA;
TwoWire I2CMCP9808 = TwoWire(0);
void setup() {
Serial.begin(9600);
//Wire.begin(SDA,SCL);
Wire.begin(22,23);
I2CMCP9808.begin(22,23);
if (!tempsensor.begin(0x18, &I2CMCP9808)) {
Serial.println("Couldn't find MCP9808! Check your connections and verify the address is correct.");
while (1);
}
tempsensor.setResolution(3);
// NodeMCU32
// pwm
ledcSetup(0, freq, 8);
ledcSetup(1, freq, 8);
//ledcSetup(1,2200,8); // buzzer frequency
//ledcAttachPin(pin_valve_o2_in , 0);
ledcAttachPin(pin_valve_inhale , 0);
ledcAttachPin(pin_valve_exhale , 1);
ledcAttachPin(buzzer , 1);
//ledcWrite(1, 128); //buzzer
pinMode(A13, INPUT); // potentiometer
// pressure sensors IO config
pinMode(p_patient, INPUT);
pinMode(p_buffer, INPUT);
pinMode(p_air_supply, INPUT);
pinMode(p_air_regulated, INPUT);
pinMode(p_inhale, INPUT);
pinMode(p_o2_supply, INPUT);
pinMode(p_o2_regulated, INPUT);
// Valves IO config
pinMode(pin_valve_air_in,OUTPUT);
//pinMode(pin_valve_exhale,OUTPUT);
pinMode(pin_valve_purge,OUTPUT);
pinMode(pin_valve_o2_in,OUTPUT);
// LEDs IO config
pinMode(redled,OUTPUT);
pinMode(yellowled,OUTPUT);
pinMode(greenled,OUTPUT);
if(stop){
//To Close all valves of the system
digitalWrite(pin_valve_air_in, LOW);
digitalWrite(pin_valve_exhale, LOW);
digitalWrite(pin_valve_purge, LOW);
digitalWrite(pin_valve_o2_in, LOW);
}
else{
//Default values for data taking
digitalWrite(pin_valve_air_in, HIGH);
//digitalWrite(pin_valve_exhale, LOW);
digitalWrite(pin_valve_purge, LOW);
digitalWrite(pin_valve_o2_in, HIGH);
}
//digitalWrite(redled, HIGH);
//digitalWrite(yellowled, HIGH);
//digitalWrite(greenled, HIGH);
DEBUG_PRINT("Hello");
Serial.println("Hello");
// current sensor configuration
devicesFound = INA.begin(1,500000); // Set to an expected 1 Amp maximum and a 100000 microOhm resistor
while (INA.begin(1, 500000) == 0)
{
DEBUG_PRINTLN("No INA device found, retrying in 10s...");
delay(1000); // Wait 10 seconds before retrying
} // while no devices detected
DEBUG_PRINT(" - Detected ");
DEBUG_PRINT(devicesFound);
DEBUG_PRINTLN(" INA devices on the I2C bus");
INA.setBusConversion(8500); // Maximum conversion time 8.244ms
INA.setShuntConversion(8500); // Maximum conversion time 8.244ms
INA.setAveraging(128); // Average each reading n-times
INA.setMode(INA_MODE_CONTINUOUS_BOTH); // Bus/shunt measured continuously
INA.AlertOnBusOverVoltage(true,5000); // Trigger alert if over 5V on bus
}
void loop() {
float res = analogRead(A13); //12 bit ADC on esp32
float pressure_patient = analogRead(p_patient); //12 bit ADC on esp32
float pressure_buffer = analogRead(p_buffer); //12 bit ADC on esp32
float pressure_asupply = analogRead(p_air_supply); //12 bit ADC on esp32
float pressure_aregulated = analogRead(p_air_regulated); //12 bit ADC on esp32
float pressure_inhale = analogRead(p_inhale); //12 bit ADC on esp32
float pressure_o2supply = analogRead(p_o2_supply); //12 bit ADC on esp32
float pressure_o2regulated = analogRead(p_o2_regulated); //12 bit ADC on esp32
tempsensor.wake(); //sensor on
float c = tempsensor.readTempC();
tempsensor.shutdown_wake(1); //sensor off
duty_cycle = res/4096.0;
if (duty_cycle > max_duty_cycle){
duty_cycle = max_duty_cycle;
}
//Serial.print("Pot ");
//Serial.print(String((int)res));
//Serial.print(" p_patient ");
//Serial.print(String((int)pressure_patient));
//Serial.print(" p_buffer ");
//Serial.print(String((int)pressure_buffer));
//Serial.print(" p_as ");
//Serial.print(String((int)pressure_asupply));
//Serial.print(" p_ar ");
//Serial.print(String((int)pressure_aregulated));
//Serial.print(" p_inhale ");
//Serial.print(String((int)pressure_inhale));
//Serial.print(" p_o2s ");
//Serial.print(String((int)pressure_o2supply));
//Serial.print(" p_o2r ");
//Serial.print(String((int)pressure_o2regulated));
//Serial.print(" Temp: ");
//Serial.print(c, 4);
//// measuring Valves voltage and current
//Serial.print(" ");
//Serial.print((float)INA.getBusMilliVolts(0)/1000.0,4);
//DEBUG_PRINT("V ");
//DEBUG_PRINT2((float)INA.getShuntMicroVolts(0)/5,0);
//DEBUG_PRINT("mA ");
//DEBUG_PRINT2((float)INA.getShuntMicroVolts(1)/5,0);
//DEBUG_PRINT("mA ");
//DEBUG_PRINT2((float)INA.getShuntMicroVolts(2)/5,0);
//DEBUG_PRINT("mA ");
//DEBUG_PRINT2((float)INA.getShuntMicroVolts(3)/5,0);
//DEBUG_PRINT("mA ");
if(stop){
ledcWrite(0, 0);//val);// exhale
ledcWrite(1, 0);//val);// exhale
}
else{
duty_cycle = 0.74;
float low_duty_cycle = 0.54;//525;
int nsteps = 1; // number of steps of 10 ms in between
float step_size = (duty_cycle-low_duty_cycle) / nsteps;
int val = (int)(255.0*duty_cycle);
int vallow = (int)(255.0*low_duty_cycle);
//Serial.print(" duty cycle ");
//Serial.println(String(duty_cycle));
//Serial.print(" raw val ");
//Serial.println(String(val));
digitalWrite(greenled, HIGH);
//ledcWrite(0, val);// inhale
ledcWrite(0, vallow);//vallow);// exhale
delay(1000);
for(int i=0; i<nsteps ; i++){
int _val = (int)( 255.0 * ( low_duty_cycle + ( i * step_size ) ) );
ledcWrite(0,_val);
delay(10);
}
ledcWrite(0, val);//val);// exhale
delay(1000);
//ledcWrite(1, 0);// exhale
//digitalWrite(greenled, LOW);
//delay(1000);
}
}
arduino/basic_io/test/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for PIO Unit Testing and project tests.
Unit Testing is a software testing method by which individual units of
source code, sets of one or more MCU program modules together with associated
control data, usage procedures, and operating procedures, are tested to
determine whether they are fit for use. Unit testing finds problems early
in the development cycle.
More information about PIO Unit Testing:
- https://docs.platformio.org/page/plus/unit-testing.html
arduino/breathing_loop_only/.gitignore deleted 100644 → 0
View file @ 302a5fef
.pio
.vscode/.browse.c_cpp.db*
.vscode/c_cpp_properties.json
.vscode/launch.json
.vscode/ipch
arduino/breathing_loop_only/include/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project header files.
A header file is a file containing C declarations and macro definitions
to be shared between several project source files. You request the use of a
header file in your project source file (C, C++, etc) located in `src` folder
by including it, with the C preprocessing directive `#include'.
```src/main.c
#include "header.h"
int main (void)
{
...
}
```
Including a header file produces the same results as copying the header file
into each source file that needs it. Such copying would be time-consuming
and error-prone. With a header file, the related declarations appear
in only one place. If they need to be changed, they can be changed in one
place, and programs that include the header file will automatically use the
new version when next recompiled. The header file eliminates the labor of
finding and changing all the copies as well as the risk that a failure to
find one copy will result in inconsistencies within a program.
In C, the usual convention is to give header files names that end with `.h'.
It is most portable to use only letters, digits, dashes, and underscores in
header file names, and at most one dot.
Read more about using header files in official GCC documentation:
* Include Syntax
* Include Operation
* Once-Only Headers
* Computed Includes
https://gcc.gnu.org/onlinedocs/cpp/Header-Files.html
arduino/breathing_loop_only/lib/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project specific (private) libraries.
PlatformIO will compile them to static libraries and link into executable file.
The source code of each library should be placed in a an own separate directory
("lib/your_library_name/[here are source files]").
For example, see a structure of the following two libraries `Foo` and `Bar`:
|--lib
| |
| |--Bar
| | |--docs
| | |--examples
| | |--src
| | |- Bar.c
| | |- Bar.h
| | |- library.json (optional, custom build options, etc) https://docs.platformio.org/page/librarymanager/config.html
| |
| |--Foo
| | |- Foo.c
| | |- Foo.h
| |
| |- README --> THIS FILE
|
|- platformio.ini
|--src
|- main.c
and a contents of `src/main.c`:
```
#include <Foo.h>
#include <Bar.h>
int main (void)
{
...
}
```
PlatformIO Library Dependency Finder will find automatically dependent
libraries scanning project source files.
More information about PlatformIO Library Dependency Finder
- https://docs.platformio.org/page/librarymanager/ldf.html
arduino/breathing_loop_only/platformio.ini deleted 100644 → 0
View file @ 302a5fef
; PlatformIO Project Configuration File
;
; Build options: build flags, source filter
; Upload options: custom upload port, speed and extra flags
; Library options: dependencies, extra library storages
; Advanced options: extra scripting
;
; Please visit documentation for the other options and examples
; https://docs.platformio.org/page/projectconf.html
[platformio]
default_envs = uno
[env]
lib_deps =
commsControl
ArduinoQueue
uCRC16Lib
build_flags = -fpermissive -I../common/include/
[env:uno]
platform = atmelavr
framework = arduino
board = uno
[env:mkrvidor4000]
platform = atmelsam
framework = arduino
board = mkrvidor4000
[env:featheresp32]
platform = espressif32
framework = arduino
board = featheresp32
upload_port = /dev/ttyUSB0
[env:due]
platform = atmelsam
framework = arduino
board = due
[env:yun]
platform = atmelavr
framework = arduino
board = yun
[env:mkrwifi1010]
platform = atmelsam
framework = arduino
board = mkrwifi1010
[env:nodemcu-32s]
platform = espressif32
framework = arduino
board = nodemcu-32s
arduino/breathing_loop_only/src/common.cpp deleted 100644 → 0
View file @ 302a5fef
#include "common.h"
void setValves(bool vin, bool vout, bool vscav, bool vpurge)
{
digitalWrite(pin_valve_air_in, vin);
digitalWrite(pin_valve_o2_in, vin);
digitalWrite(pin_valve_inhale, vout);
digitalWrite(pin_valve_exhale, vscav);
digitalWrite(pin_valve_purge, vpurge);
}
arduino/breathing_loop_only/src/common.h deleted 100644 → 0
View file @ 302a5fef
#include <Arduino.h>
#if defined(ARDUINO_FEATHER_ESP32)
#define BOARD "HUZZAH32"
#include <huzzah32_pinout.h>
#elif defined(ARDUINO_NodeMCU_32S)
#define BOARD "ESP32"
#include <nodemcu_32s_pinout.h>
#elif defined(ARDUINO_AVR_UNO)
#define BOARD "UNO"
#include <Arduino_uno_pinout.h>
#elif defined(ARDUINO_SAMD_MKRVIDOR4000)
#define BOARD "VIDOR"
#include <Arduino_MKR_4000_Vidor_pinout.h>
#elif defined(ARDUINO_SAMD_MKRWIFI1010)
#define BOARD "MKR1010"
#include <Arduino_MKR_1010_WIFI_pinout.h>
#elif defined(ARDUINO_SAM_DUE)
#define BOARD "MKR1010"
#include <Arduino_Due_pinout.h>
#elif defined(ARDUINO_AVR_YUN)
#define BOARD "MKR1010"
#include <Arduino_Yun_pinout.h>
#endif
// input params
enum hev_modes : byte
{
HEV_MODE_PS,
HEV_MODE_CPAP,
HEV_MODE_PRVC,
HEV_MODE_TEST
};
enum valve_states : bool
{
V_OPEN = LOW,
V_CLOSED = HIGH
};
void setValves(bool vin, bool vout, bool vscav, bool vpurge);
arduino/breathing_loop_only/src/main.cpp deleted 100644 → 0
View file @ 302a5fef
#include <Arduino.h>
#include "test_hw_loop.h"
#include "common.h"
//#include <LiquidCrystal.h>
//LiquidCrystal lcd(pin_lcd_rs, pin_lcd_en, pin_lcd_d4, pin_lcd_d5, pin_lcd_d6, pin_lcd_d7);
int ventilation_mode = HEV_MODE_PS;
float working_pressure = 1; //?
float inspiratory_minute_volume = 6000; // ml/min
float respiratory_rate = 15; // 10-40 +-1 ;aka breaths_per_min
float inspiratory_pressure = 10; // 10-80 cmH2O +-1
//float tidal_volume = 200; // calc 200-1500ml +- 100
float inspiratory_time = 1.0; // 0.4-1.5s +-0.1
float pause_time = 1.0; // range?
//float expiratory_time ; // calc
float expiratory_minute_volume; // calc?? same as inspiratory_minute_volume?
float trigger_sensitivity;
// calculations
float calc_tidal_volume()
{
return inspiratory_minute_volume / respiratory_rate;
}
float calc_expiration_time()
{
float total_respiratory_time = 60.0 / respiratory_rate;
// total = expire + inspire + pause
return (total_respiratory_time - inspiratory_time - pause_time);
}
float calc_expiratory_minute_volume()
{
// probably need to calculate this from readings
return 0;
}
// FROM OVERLEAF DOC
// Working pressure, corresponding to the manually set and monitored input pressure to the unit
// Inspiratory Minute Volume setting
// Breaths per minute setting
// Tidal volume display, based on previous two parameters
// Inspiration time setting
// Pause time setting
// expiration time display based on previous two parameters
// expired minute volume
// Airway pressure display based on the reading of $P_2$ ??? not a setting
// PEEP setting ??? external
// Trigger sensitivity to patient initiated breath
void setup()
{
pinMode(pin_valve_air_in, OUTPUT);
pinMode(pin_valve_o2_in, OUTPUT);
pinMode(pin_valve_inhale, OUTPUT);
pinMode(pin_valve_exhale, OUTPUT);
pinMode(pin_valve_purge, OUTPUT);
pinMode(pin_p_air_supply, INPUT);
pinMode(pin_p_air_regulated, INPUT);
pinMode(pin_p_buffer, INPUT);
pinMode(pin_p_inhale, INPUT);
pinMode(pin_p_patient, INPUT);
pinMode(pin_temp, INPUT);
pinMode(pin_led_0, OUTPUT);
pinMode(pin_led_1, OUTPUT);
pinMode(pin_led_2, OUTPUT);
pinMode(pin_buzzer, OUTPUT);
pinMode(pin_button_0, INPUT);
Serial.begin(9600);
// lcd.begin(16, 2); // Declare number of columns and rows
}
void loop()
{
// put your main code here, to run repeatedly:
//Serial.println(BOARD);
// delay(1000);
// buzzer
// tone(pin, freq (Hz), duration);
//breath_cycle();
FSM_assignment();
FSM_breath_cycle();
delay(10);
}
arduino/breathing_loop_only/src/test_hw_loop.cpp deleted 100644 → 0
View file @ 302a5fef
#include "test_hw_loop.h"
#include "common.h"
/*
The Idea of this code is to unfold the FSM in two: one to assign the transitions and the second one to program the states.
*/
uint64_t FSM_time;
int timeout;
byte lab_cycle_mode = 0;
int bs_state = BS_IDLE;
bool start = LOW;
int next_state;
//This is used to assign the transitions of the fsm
void FSM_assignment( ) {
if (millis() > FSM_time + timeout ) {
switch (bs_state)
{
case BS_IDLE:
if (start == LOW)
{
next_state = BS_BUFF_PREFILL;
FSM_time = millis();
Serial.println("Exit IDLE") ;
}
else
{
next_state = BS_IDLE;
}
break;
case BS_BUFF_PREFILL:
next_state = BS_BUFF_FILL;
break;
case BS_BUFF_FILL:
next_state = BS_BUFF_LOADED;
break;
case BS_BUFF_LOADED:
switch (lab_cycle_mode)
{
case LAB_MODE_FLUSH:
next_state = BS_BUFF_FLUSH;
break;
case LAB_MODE_PURGE:
next_state = BS_BUFF_PURGE;
break;
default:
next_state = BS_BUFF_PRE_INHALE;
}
break;
case BS_BUFF_PRE_INHALE:
next_state = BS_INHALE;
break;
case BS_INHALE:
next_state = BS_PAUSE;
break;
case BS_PAUSE:
next_state = BS_EXHALE_FILL;
break;
case BS_EXHALE_FILL:
next_state = BS_EXHALE;
break;
case BS_EXHALE:
next_state = BS_BUFF_LOADED;
break;
case BS_BUFF_PURGE:
next_state = BS_BUFF_PREFILL;
break;
case BS_BUFF_FLUSH:
next_state = BS_IDLE;
break;
default:
next_state = bs_state;
}
bs_state = next_state;
FSM_time = millis();
}
}
void FSM_breath_cycle()
{
// basic cycle for testing hardware
start = digitalRead(pin_button_0);
switch (bs_state)
{
case BS_IDLE:
if (start == LOW)
{
FSM_time = millis();
}
else
{
timeout = 1000;
}
setValves(V_CLOSED, V_OPEN, V_OPEN, V_CLOSED);
break;
case BS_BUFF_PREFILL:
setValves(V_CLOSED, V_CLOSED, V_OPEN, V_CLOSED);
timeout = 1000;
break;
case BS_BUFF_FILL:
setValves(V_OPEN, V_CLOSED, V_OPEN, V_CLOSED);
timeout = 500;
break;
case BS_BUFF_LOADED:
setValves(V_CLOSED, V_CLOSED, V_OPEN, V_CLOSED);
switch (lab_cycle_mode)
{
case LAB_MODE_FLUSH:
timeout = 500;
break;
case LAB_MODE_PURGE:
timeout =500;
break;
default:
timeout =1500;
}
break;
case BS_BUFF_PRE_INHALE:
setValves(V_CLOSED, V_CLOSED, V_CLOSED, V_CLOSED);
timeout =100;
break;
case BS_INHALE:
setValves(V_CLOSED, V_OPEN, V_CLOSED, V_CLOSED);
timeout =100;
break;
case BS_PAUSE:
setValves(V_CLOSED, V_CLOSED, V_CLOSED, V_CLOSED);
timeout =1000;
break;
case BS_EXHALE_FILL:
setValves(V_OPEN, V_CLOSED, V_OPEN, V_CLOSED);
timeout =1000;
break;
case BS_EXHALE:
setValves(V_CLOSED, V_CLOSED, V_OPEN, V_CLOSED);
timeout =10;
break;
case BS_BUFF_PURGE:
setValves(V_CLOSED, V_CLOSED, V_OPEN, V_OPEN);
timeout =1000;
break;
case BS_BUFF_FLUSH:
setValves(V_CLOSED, V_OPEN, V_OPEN, V_CLOSED);
timeout =1000;
break;
}
Serial.println("state FSM_breath_cycle: " + String(bs_state));
Serial.println("start: " + String(start));
}
arduino/breathing_loop_only/src/test_hw_loop.h deleted 100644 → 0
View file @ 302a5fef
#include <Arduino.h>
void FSM_assignment();
void FSM_breath_cycle();
// states
enum BS_STATES : byte
{
BS_IDLE,
BS_BUFF_PREFILL,
BS_BUFF_FILL,
BS_BUFF_LOADED,
BS_BUFF_PRE_INHALE,
BS_INHALE,
BS_PAUSE,
BS_EXHALE_FILL,
BS_EXHALE,
BS_BUFF_PURGE,
BS_BUFF_FLUSH
};
enum lab_cycle_modes : byte
{
LAB_MODE_BREATHE = 0,
LAB_MODE_PURGE = 1,
LAB_MODE_FLUSH = 2
};
arduino/breathing_loop_only/test/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for PIO Unit Testing and project tests.
Unit Testing is a software testing method by which individual units of
source code, sets of one or more MCU program modules together with associated
control data, usage procedures, and operating procedures, are tested to
determine whether they are fit for use. Unit testing finds problems early
in the development cycle.
More information about PIO Unit Testing:
- https://docs.platformio.org/page/plus/unit-testing.html
arduino/breathing_with_comms/.gitignore deleted 100644 → 0
View file @ 302a5fef
.pio
.vscode/.browse.c_cpp.db*
.vscode/c_cpp_properties.json
.vscode/launch.json
.vscode/ipch
arduino/co2_sensor/.gitignore deleted 100644 → 0
View file @ 302a5fef
.pio
.vscode/.browse.c_cpp.db*
.vscode/c_cpp_properties.json
.vscode/launch.json
.vscode/ipch
arduino/co2_sensor/include/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project header files.
A header file is a file containing C declarations and macro definitions
to be shared between several project source files. You request the use of a
header file in your project source file (C, C++, etc) located in `src` folder
by including it, with the C preprocessing directive `#include'.
```src/main.c
#include "header.h"
int main (void)
{
...
}
```
Including a header file produces the same results as copying the header file
into each source file that needs it. Such copying would be time-consuming
and error-prone. With a header file, the related declarations appear
in only one place. If they need to be changed, they can be changed in one
place, and programs that include the header file will automatically use the
new version when next recompiled. The header file eliminates the labor of
finding and changing all the copies as well as the risk that a failure to
find one copy will result in inconsistencies within a program.
In C, the usual convention is to give header files names that end with `.h'.
It is most portable to use only letters, digits, dashes, and underscores in
header file names, and at most one dot.
Read more about using header files in official GCC documentation:
* Include Syntax
* Include Operation
* Once-Only Headers
* Computed Includes
https://gcc.gnu.org/onlinedocs/cpp/Header-Files.html
arduino/co2_sensor/lib/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project specific (private) libraries.
PlatformIO will compile them to static libraries and link into executable file.
The source code of each library should be placed in a an own separate directory
("lib/your_library_name/[here are source files]").
For example, see a structure of the following two libraries `Foo` and `Bar`:
|--lib
| |
| |--Bar
| | |--docs
| | |--examples
| | |--src
| | |- Bar.c
| | |- Bar.h
| | |- library.json (optional, custom build options, etc) https://docs.platformio.org/page/librarymanager/config.html
| |
| |--Foo
| | |- Foo.c
| | |- Foo.h
| |
| |- README --> THIS FILE
|
|- platformio.ini
|--src
|- main.c
and a contents of `src/main.c`:
```
#include <Foo.h>
#include <Bar.h>
int main (void)
{
...
}
```
PlatformIO Library Dependency Finder will find automatically dependent
libraries scanning project source files.
More information about PlatformIO Library Dependency Finder
- https://docs.platformio.org/page/librarymanager/ldf.html
arduino/co2_sensor/platformio.ini deleted 100644 → 0
View file @ 302a5fef
; PlatformIO Project Configuration File
;
; Build options: build flags, source filter
; Upload options: custom upload port, speed and extra flags
; Library options: dependencies, extra library storages
; Advanced options: extra scripting
;
; Please visit documentation for the other options and examples
; https://docs.platformio.org/page/projectconf.html
[env:nodemcu-32s]
platform = espressif32
board = nodemcu-32s
framework = arduino
arduino/co2_sensor/src/main.cpp deleted 100644 → 0
View file @ 302a5fef
#include <Arduino.h>
//#include <HardwareSerial.h>
HardwareSerial co2_serial(2); // RX2 = pin IO16, TX2 = pin IO17
// #define RXD2 16
// #define TXD2 17
unsigned char hexdata[9] = {0xFF, 0x01, 0x86, 0x00, 0x00, 0x00, 0x00, 0x00, 0x79}; //Read the gas density command /Don't change the order
void setup()
{
Serial.begin(9600);
while (!Serial)
{
delay(1);
}
Serial.println("setup Serial1 ok");
co2_serial.begin(9600);
// Serial2.begin(9600, SERIAL_8N1, RXD2, TXD2);
// while (!Serial2)
while (!co2_serial)
{
delay(1);
}
Serial.println("setup Serial2 ok");
}
void loop()
{
co2_serial.write(hexdata, 9);
// delay(500);
// Serial2.write(hexdata, 9);
delay(500);
for (int i = 0, j = 0; i < 9; i++) {
if (co2_serial.available() > 0) {
// if (Serial2.available() > 0) {
long hi, lo, CO2;
int ch = co2_serial.read();
// int ch = Serial2.read();
if (i == 2) {
hi = ch;
} //High concentration
if (i == 3) {
lo = ch;
} //Low concentration
if (i == 8) {
CO2 = hi * 256 + lo; //CO2 concentration
Serial.print("CO2 concentration: ");
Serial.print(CO2);
Serial.println("ppm");
}
}
}
}
\ No newline at end of file
arduino/co2_sensor/test/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for PIO Unit Testing and project tests.
Unit Testing is a software testing method by which individual units of
source code, sets of one or more MCU program modules together with associated
control data, usage procedures, and operating procedures, are tested to
determine whether they are fit for use. Unit testing finds problems early
in the development cycle.
More information about PIO Unit Testing:
- https://docs.platformio.org/page/plus/unit-testing.html
arduino/common/include/Arduino_Due_pinout.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// Arduino Due
#define BOARD "DUE"
#define HEV_FULL_SYSTEM
......
arduino/common/include/Arduino_MKR_1010_WIFI_pinout.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// Arduino MKR 1010 Wifi
#define BOARD "MKR1010"
......
arduino/common/include/Arduino_MKR_4000_Vidor_pinout.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// arduino MKR 4000 Vidor
#define BOARD "VIDOR"
......
arduino/common/include/Arduino_Nano_33_IOT_pinout.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// Arduino Nano 33 IOT
#define BOARD "NANO33IOT"
......
arduino/common/include/Arduino_Yun_pinout.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// Arduino Yun
#define BOARD "YUN"
// pwm pins
......
arduino/common/include/Arduino_uno_pinout.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// Arduino Uno
#define BOARD "UNO"
// pwm pins
......
arduino/common/include/Arduino_uno_pinout_minisystem.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// Arduino Uno
#define BOARD "UNO"
// pwm pins
......
arduino/common/include/huzzah32_pinout.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// ESP32 HUZZAH
#define BOARD "HUZZAH32"
#define CHIP_ESP32
......
arduino/common/include/nodemcu_32s_pinout.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// Node MCU 32s
#define BOARD "NODEMCU32S"
#define CHIP_ESP32
......
arduino/common/lib/CommsControl/CommsCommon.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef COMMSCONSTANTS_H
#define COMMSCONSTANTS_H
......
arduino/common/lib/CommsControl/CommsControl.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "CommsControl.h"
CommsControl::CommsControl(uint32_t baudrate) {
......
arduino/common/lib/CommsControl/CommsControl.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef COMMS_CONTROL_H
#define COMMS_CONTROL_H
......
arduino/common/lib/CommsControl/CommsFormat.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "CommsFormat.h"
// constructor to init variables
......
arduino/common/lib/CommsControl/CommsFormat.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef COMMSFORMAT_H
#define COMMSFORMAT_H
......
arduino/esp32_noradio/.gitignore deleted 100644 → 0
View file @ 302a5fef
.pio
.vscode/.browse.c_cpp.db*
.vscode/c_cpp_properties.json
.vscode/launch.json
.vscode/ipch
arduino/esp32_noradio/.travis.yml deleted 100644 → 0
View file @ 302a5fef
# Continuous Integration (CI) is the practice, in software
# engineering, of merging all developer working copies with a shared mainline
# several times a day < https://docs.platformio.org/page/ci/index.html >
#
# Documentation:
#
# * Travis CI Embedded Builds with PlatformIO
# < https://docs.travis-ci.com/user/integration/platformio/ >
#
# * PlatformIO integration with Travis CI
# < https://docs.platformio.org/page/ci/travis.html >
#
# * User Guide for `platformio ci` command
# < https://docs.platformio.org/page/userguide/cmd_ci.html >
#
#
# Please choose one of the following templates (proposed below) and uncomment
# it (remove "# " before each line) or use own configuration according to the
# Travis CI documentation (see above).
#
#
# Template #1: General project. Test it using existing `platformio.ini`.
#
# language: python
# python:
# - "2.7"
#
# sudo: false
# cache:
# directories:
# - "~/.platformio"
#
# install:
# - pip install -U platformio
# - platformio update
#
# script:
# - platformio run
#
# Template #2: The project is intended to be used as a library with examples.
#
# language: python
# python:
# - "2.7"
#
# sudo: false
# cache:
# directories:
# - "~/.platformio"
#
# env:
# - PLATFORMIO_CI_SRC=path/to/test/file.c
# - PLATFORMIO_CI_SRC=examples/file.ino
# - PLATFORMIO_CI_SRC=path/to/test/directory
#
# install:
# - pip install -U platformio
# - platformio update
#
# script:
# - platformio ci --lib="." --board=ID_1 --board=ID_2 --board=ID_N
arduino/esp32_noradio/.vscode/extensions.json deleted 100644 → 0
View file @ 302a5fef
{
// See http://go.microsoft.com/fwlink/?LinkId=827846
// for the documentation about the extensions.json format
"recommendations": [
"platformio.platformio-ide"
]
}
arduino/esp32_noradio/include/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project header files.
A header file is a file containing C declarations and macro definitions
to be shared between several project source files. You request the use of a
header file in your project source file (C, C++, etc) located in `src` folder
by including it, with the C preprocessing directive `#include'.
```src/main.c
#include "header.h"
int main (void)
{
...
}
```
Including a header file produces the same results as copying the header file
into each source file that needs it. Such copying would be time-consuming
and error-prone. With a header file, the related declarations appear
in only one place. If they need to be changed, they can be changed in one
place, and programs that include the header file will automatically use the
new version when next recompiled. The header file eliminates the labor of
finding and changing all the copies as well as the risk that a failure to
find one copy will result in inconsistencies within a program.
In C, the usual convention is to give header files names that end with `.h'.
It is most portable to use only letters, digits, dashes, and underscores in
header file names, and at most one dot.
Read more about using header files in official GCC documentation:
* Include Syntax
* Include Operation
* Once-Only Headers
* Computed Includes
https://gcc.gnu.org/onlinedocs/cpp/Header-Files.html
arduino/esp32_noradio/lib/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project specific (private) libraries.
PlatformIO will compile them to static libraries and link into executable file.
The source code of each library should be placed in a an own separate directory
("lib/your_library_name/[here are source files]").
For example, see a structure of the following two libraries `Foo` and `Bar`:
|--lib
| |
| |--Bar
| | |--docs
| | |--examples
| | |--src
| | |- Bar.c
| | |- Bar.h
| | |- library.json (optional, custom build options, etc) https://docs.platformio.org/page/librarymanager/config.html
| |
| |--Foo
| | |- Foo.c
| | |- Foo.h
| |
| |- README --> THIS FILE
|
|- platformio.ini
|--src
|- main.c
and a contents of `src/main.c`:
```
#include <Foo.h>
#include <Bar.h>
int main (void)
{
...
}
```
PlatformIO Library Dependency Finder will find automatically dependent
libraries scanning project source files.
More information about PlatformIO Library Dependency Finder
- https://docs.platformio.org/page/librarymanager/ldf.html
arduino/esp32_noradio/platformio.ini deleted 100644 → 0
View file @ 302a5fef
; PlatformIO Project Configuration File
;
; Build options: build flags, source filter
; Upload options: custom upload port, speed and extra flags
; Library options: dependencies, extra library storages
; Advanced options: extra scripting
;
; Please visit documentation for the other options and examples
; https://docs.platformio.org/page/projectconf.html
[env:featheresp32]
platform = espressif32
framework = arduino
board = featheresp32
upload_port = /dev/ttyUSB0
; [env:nodemcu-32s]
; platform = espressif32
; framework = arduino
; board = nodemcu-32s
arduino/esp32_noradio/src/main.cpp deleted 100644 → 0
View file @ 302a5fef
#include <Arduino.h>
#include <WiFi.h>
void setup() {
// put your setup code here, to run once:
// Huzzah32
// WiFi.mode(WIFI_MODE_NULL);
WiFi.mode(WIFI_OFF);
btStop();
// ADC2
pinMode(A0, INPUT);
pinMode(A1, INPUT);
pinMode(A5, INPUT);
pinMode(A12, INPUT);
pinMode(A11, INPUT);
pinMode(A10, INPUT);
pinMode(A8, INPUT);
pinMode(A6, INPUT);
// ADC1
pinMode(A2, INPUT);
pinMode(A3, INPUT);
pinMode(A4, INPUT);
pinMode(A9, INPUT);
pinMode(A7, INPUT);
Serial.begin(9600);
}
void loop() {
// put your main code here, to run repeatedly:
int aA0 = analogRead(A0);
int aA1 = analogRead(A1);
int aA5 = analogRead(A5);
int aA12 = analogRead(A12);
int aA11 = analogRead(A11);
int aA10 = analogRead(A10);
int aA8 = analogRead(A8);
int aA6 = analogRead(A6);
int aA2 = analogRead(A2);
int aA3 = analogRead(A3);
int aA4 = analogRead(A4);
int aA9 = analogRead(A9);
int aA7 = analogRead(A7);
Serial.println("aA0 "+String(aA0));
Serial.println("aA1 "+String(aA1));
Serial.println("aA5 "+String(aA5));
Serial.println("aA12 "+String(aA12));
Serial.println("aA11 "+String(aA11));
Serial.println("aA10 "+String(aA10));
Serial.println("aA8 "+String(aA8 ));
Serial.println("aA6 "+String(aA6 ));
Serial.println("aA2 "+String(aA2 ));
Serial.println("aA3 "+String(aA3 ));
Serial.println("aA4 "+String(aA4 ));
Serial.println("aA9 "+String(aA9 ));
Serial.println("aA7 "+String(aA7 ));
delay(3000);
}
arduino/esp32_noradio/test/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for PIO Unit Testing and project tests.
Unit Testing is a software testing method by which individual units of
source code, sets of one or more MCU program modules together with associated
control data, usage procedures, and operating procedures, are tested to
determine whether they are fit for use. Unit testing finds problems early
in the development cycle.
More information about PIO Unit Testing:
- https://docs.platformio.org/page/plus/unit-testing.html
arduino/hev_prototype_v1/extra_script.py
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
Import("env")
# General options that are passed to the C and C++ compilers
......
arduino/hev_prototype_v1/src/AlarmLoop.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "AlarmLoop.h"
AlarmLoop::AlarmLoop()
......@@ -47,19 +70,32 @@ void AlarmLoop::fireAlarms() {
}
void AlarmLoop::updateValues(readings<float> fast_data, cycle_readings cr) {
_alarms.values[ALARM_CODES::CHECK_P_PATIENT] = static_cast<float>(fast_data.pressure_patient);
_alarms.values[ALARM_CODES::LOW_FIO2] = static_cast<float>(cr.fiO2_percent);
_alarms.values[ALARM_CODES::HIGH_FIO2] = static_cast<float>(cr.fiO2_percent);
_alarms.values[ALARM_CODES::APNEA] = static_cast<float>(cr.apnea_index);
_alarms.values[ALARM_CODES::HIGH_PRESSURE] = static_cast<float>(fast_data.pressure_patient);
_alarms.values[ALARM_CODES::HIGH_RR] = static_cast<float>(cr.respiratory_rate);
_alarms.values[ALARM_CODES::HIGH_VTE] = static_cast<float>(cr.exhaled_tidal_volume);
_alarms.values[ALARM_CODES::HIGH_VTI] = static_cast<float>(cr.inhaled_tidal_volume);
_alarms.values[ALARM_CODES::LOW_VTE] = static_cast<float>(cr.exhaled_tidal_volume);
_alarms.values[ALARM_CODES::LOW_VTI] = static_cast<float>(cr.inhaled_tidal_volume);
// _alarms.values[ALARM_CODES::LOW_PEEP] = static_cast<float>(cr.peep);
_alarms.values[ALARM_CODES::AIR_FAIL] = static_cast<float>(fast_data.pressure_air_regulated);
_alarms.values[ALARM_CODES::O2_FAIL] = static_cast<float>(fast_data.pressure_o2_regulated);
// ALARM_CODES::ALARM_CODE_UNKNOWN
setAlarm<float>(ALARM_CODES::APNEA , _alarms.values, static_cast<float>(cr.apnea_index));
// setAlarm<float>(ALARM_CODES::CHECK_VALVE_EXHALE , _alarms.values, );
setAlarm<float>(ALARM_CODES::CHECK_P_PATIENT , _alarms.values, static_cast<float>(fast_data.pressure_patient));
// setAlarm<float>(ALARM_CODES::EXPIRATION_SENSE_FAULT_OR_LEAK, _alarms.values, );
// setAlarm<float>(ALARM_CODES::EXPIRATION_VALVE_Leak , _alarms.values, );
setAlarm<float>(ALARM_CODES::HIGH_FIO2 , _alarms.values, static_cast<float>(cr.fiO2_percent));
setAlarm<float>(ALARM_CODES::HIGH_PRESSURE , _alarms.values, static_cast<float>(fast_data.pressure_patient));
setAlarm<float>(ALARM_CODES::HIGH_RR , _alarms.values, static_cast<float>(cr.respiratory_rate));
setAlarm<float>(ALARM_CODES::HIGH_VTE , _alarms.values, static_cast<float>(cr.exhaled_tidal_volume));
setAlarm<float>(ALARM_CODES::LOW_VTE , _alarms.values, static_cast<float>(cr.exhaled_tidal_volume));
setAlarm<float>(ALARM_CODES::HIGH_VTI , _alarms.values, static_cast<float>(cr.inhaled_tidal_volume));
setAlarm<float>(ALARM_CODES::LOW_VTI , _alarms.values, static_cast<float>(cr.inhaled_tidal_volume));
// setAlarm<float>(ALARM_CODES::INTENTIONAL_STOP , _alarms.values, );
// ALARM_CODES::LOW_BATTERY
setAlarm<float>(ALARM_CODES::LOW_FIO2 , _alarms.values, static_cast<float>(cr.fiO2_percent));
// setAlarm<float>(ALARM_CODES::OCCLUSION , _alarms.values, );
// setAlarm<float>(ALARM_CODES::HIGH_PEEP , _alarms.values, );
// setAlarm<float>(ALARM_CODES::LOW_PEEP , _alarms.values, static_cast<float>(cr.peep);
// ALARM_CODES::AC_POWER_DISCONNECTION
// ALARM_CODES::BATTERY_FAULT_SRVC
// ALARM_CODES::BATTERY_CHARGE
setAlarm<float>(ALARM_CODES::AIR_FAIL , _alarms.values, static_cast<float>(fast_data.pressure_air_regulated));
setAlarm<float>(ALARM_CODES::O2_FAIL , _alarms.values, static_cast<float>(fast_data.pressure_o2_regulated));
// setAlarm<float>(ALARM_CODES::PRESSURE_SENSOR_FAULT , _alarms.values, );
// setAlarm<float>(ALARM_CODES::ARDUINO_FAIL , _alarms.values, );
}
void AlarmLoop::setBatteryThresholds()
......
arduino/hev_prototype_v1/src/AlarmLoop.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef ALARM_LOOP_H
#define ALARM_LOOP_H
......
arduino/hev_prototype_v1/src/AudioVisualController.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "AudioVisualController.h"
#include "common.h"
......
arduino/hev_prototype_v1/src/AudioVisualController.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef AUDIOVISUALCONTROLLER_H
#define AUDIOVISUALCONTROLLER_H
......
arduino/hev_prototype_v1/src/BreathingLoop.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "BreathingLoop.h"
#include "common.h"
/*
......@@ -12,6 +35,8 @@ BreathingLoop::BreathingLoop()
_fsm_timeout = 1000;
_tsig_time = tnow;
_tsig_timeout = 100;
_calculations_time = tnow;
_calculations_timeout = 13;
_ventilation_mode = VENTILATION_MODE::PC_AC;
_bl_state = BL_STATES::IDLE;
......@@ -77,12 +102,17 @@ BreathingLoop::BreathingLoop()
_cycle_index = 0;
_min_inhale_time = 150;
_min_exhale_time = 300;
_min_exhale_time = 800;
_max_exhale_time = 10000; // for mandatory cycle - changed to 30s for the sponteneous breath testing
initTargets();
setVentilationMode(_ventilation_mode);
_o2_valve_frac = 0;
_expected_fiO2 = 0.21;
_new_expected_fiO2 = 0.21;
}
void BreathingLoop::initTargets()
......@@ -97,7 +127,7 @@ void BreathingLoop::initTargets()
_targets_pcac.peep = 5;
_targets_pcac.fiO2_percent = 21;
_targets_pcac.inhale_trigger_threshold = 1; // abs flow ? unit /
_targets_pcac.inhale_trigger_threshold = 5; // abs flow ? unit /
_targets_pcac.exhale_trigger_threshold = 0.25; // 25% of the peak flow
_targets_pcac.buffer_lower_pressure = 285.0;
......@@ -315,6 +345,20 @@ void BreathingLoop::updateCycleReadings()
}
void BreathingLoop::updateCalculations() {
uint32_t tnow = static_cast<uint32_t>(millis());
_calculations.flow = getFlow(); // TODO: can be run every 1 ms instead of every arduino cycle
if (tnow - _calculations_time >= _calculations_timeout) {
//_calculations.flow_calc = calculateFlow(_readings_avgs.timestamp, _readings_avgs.pressure_patient, _readings_avgs.pressure_buffer);
_calculations.flow_calc = calculateFlow(_readings_avgs.timestamp, _readings_avgs.pressure_patient, _readings_avgs.pressure_buffer);
_calculations_time = tnow;
}
// _calculations.flow_calc = calculateFlow(tnow, adcToMillibarFloat(_readings_raw.pressure_patient, _calib_avgs.pressure_patient), adcToMillibarFloat(_readings_raw.pressure_buffer, _calib_avgs.pressure_buffer));
_calculations.volume = getVolume();
_calculations.pressure_airway = getAirwayPressure();
}
void BreathingLoop::setVentilationMode(VENTILATION_MODE mode)
{
_ventilation_mode = mode;
......@@ -358,7 +402,7 @@ VENTILATION_MODE BreathingLoop::getVentilationMode() { return _ventilation_mode;
readings<float> BreathingLoop::getReadingAverages() { return _readings_avgs; }
readings<float> BreathingLoop::getRawReadings() { return _readings_raw; }
calculations<float> BreathingLoop::getCalculations() { return _calculations; }
float BreathingLoop::getPEEP()
{
......@@ -429,7 +473,7 @@ void BreathingLoop::FSM_assignment() {
next_state = BL_STATES::PAUSE;
break;
case BL_STATES::PAUSE:
next_state = BL_STATES::EXHALE;
next_state = BL_STATES::EXHALE;
break;
case BL_STATES::EXHALE:
if (_running == false) {
......@@ -499,6 +543,8 @@ void BreathingLoop::FSM_breathCycle()
bool mand_ex = false;
bool mand_vol = false;
float o2_frac_pressure = _o2_valve_frac * _targets_current->buffer_upper_pressure;
// basic cycle for testing hardware
switch (_bl_state) {
case BL_STATES::IDLE:
......@@ -589,22 +635,36 @@ void BreathingLoop::FSM_breathCycle()
//logMsg("pause "+String(_valley_flow_time)+" "+_measured_durations.inhale+ " "+_measured_durations.exhale+" " +_fsm_timeout);
_states_durations.exhale = calculateDurationExhale();
//logMsg("pause x "+String(_valley_flow_time)+" "+_measured_durations.inhale+ " "+_measured_durations.exhale+" " +_fsm_timeout +" "+_states_durations.exhale);
doO2ValveFrac(_targets_current->fiO2_percent, _targets_current->buffer_upper_pressure);
break;
case BL_STATES::EXHALE:
_peak_flow = -100000; // reset peak after inhale
_peak_flow_time = millis();
_fsm_timeout = _states_durations.exhale;
// uint32_t tnow = millis();
_expected_fiO2 = _new_expected_fiO2;
if(doExhalePurge()){
_valves_controller.setValves(VALVE_STATE::CLOSED, VALVE_STATE::CLOSED, VALVE_STATE::CLOSED, VALVE_STATE::OPEN, VALVE_STATE::OPEN);
// fill buffer to required pressure or timeout ; close valves 10ms before timeout.
if((_readings_avgs.pressure_buffer >= _targets_current->buffer_upper_pressure) || (millis() - _fsm_time >= (_fsm_timeout - 10))){
} else if((_readings_avgs.pressure_buffer >= _targets_current->buffer_upper_pressure) || (millis() - _fsm_time >= (_fsm_timeout - 10))){
_valves_controller.setValves(VALVE_STATE::CLOSED, VALVE_STATE::CLOSED, VALVE_STATE::CLOSED, VALVE_STATE::OPEN, VALVE_STATE::CLOSED);
} else if(_readings_avgs.pressure_buffer < _targets_current->buffer_lower_pressure){
_valves_controller.setValves(VALVE_STATE::OPEN, VALVE_STATE::OPEN, VALVE_STATE::CLOSED, VALVE_STATE::OPEN, VALVE_STATE::CLOSED);
if(_readings_avgs.pressure_buffer <= o2_frac_pressure ) {
// fill O2
_valves_controller.setValves(VALVE_STATE::CLOSED, VALVE_STATE::OPEN, VALVE_STATE::CLOSED, VALVE_STATE::OPEN, VALVE_STATE::CLOSED);
} else {
// fill AIR
_valves_controller.setValves(VALVE_STATE::OPEN, VALVE_STATE::CLOSED, VALVE_STATE::CLOSED, VALVE_STATE::OPEN, VALVE_STATE::CLOSED);
}
}
//logMsg("exhale "+String(_peak_flow_time)+" "+_measured_durations.inhale+ " "+_measured_durations.exhale+" " +_fsm_timeout);
measurePEEP();
digitalWrite(pin_led_red, LOW);
_mandatory_inhale = inhaleTrigger();
_pressure_buffer_fitter.resetCalculation(_peak_flow_time);
_pressure_patient_fitter.resetCalculation(_peak_flow_time);
break;
case BL_STATES::STANDBY:
_valves_controller.setValves(VALVE_STATE::CLOSED, VALVE_STATE::CLOSED, VALVE_STATE::CLOSED, VALVE_STATE::OPEN, VALVE_STATE::CLOSED);
......@@ -878,6 +938,23 @@ ValvesController* BreathingLoop::getValvesController()
// _total_cycle_duration[N-1] = newtotal;
// }
float BreathingLoop::calculateFlow(const uint32_t &current_time, const float &pressure_patient, const float &pressure_buffer, float volume_tube, float volume_buffer) {
float dp_tube, dp_buffer, offset;
uint8_t linreg;
float const_pressure = 1013.; //mbar
_pressure_buffer_fitter .appendPoints(current_time, pressure_buffer + const_pressure);
_pressure_patient_fitter.appendPoints(current_time, pressure_patient + const_pressure);
linreg = _pressure_buffer_fitter .linearRegression(dp_buffer, offset);
linreg += _pressure_patient_fitter.linearRegression(dp_tube , offset);
if (linreg == 0) return (((-1./(pressure_patient + const_pressure)) * ((dp_tube * volume_tube) + (dp_buffer * volume_buffer))));// - (1. * 4 * dp_tube));
//if (linreg == 0) return _pressure_buffer_fitter.GetSumX2(); //(((-1./(pressure_patient + const_pressure)) * ((dp_tube * volume_tube) + (dp_buffer * volume_buffer))));// - (1. * 4 * dp_tube));
else return 0;
//return dp_buffer;
}
float BreathingLoop::getFlow(){
const float temperature = 298.0;
const float pressure = 1030.0;
......@@ -1224,3 +1301,44 @@ void BreathingLoop::tsigReset()
}
}
void BreathingLoop::doO2ValveFrac(float desired_fiO2, float pressure_change)
{
// this assumes o2 and air valves fill at same rates, AND that we fill sequentially - o2, then air.
// pressure_change is proportional to the amount of volume exhanged in a cycle
// I think this equals tidal inhale volume
// we calculate amount of o2 : air to input
// if we have to fill 300 mbar, we fill up to (o2_frac * 300) mbar of o2, then (1-o2_frac)*300 mbar air
// we estimate the current o2 fraction, rather than wait for o2 sensor
// we should have an alarm if o2 sensor and o2 expectation is wrong after 1 min
float o2change = (desired_fiO2*(1000+pressure_change) - _expected_fiO2 *1000 -0.21*pressure_change)/(0.79*pressure_change);
if (o2change > 1){
o2change = 1;
} else if (o2change < 0){
o2change = 0;
}
_new_expected_fiO2 = _expected_fiO2*1000 + o2change*pressure_change + 0.21*(1-o2change)*pressure_change;
_o2_valve_frac = o2change;
// airValveFrac = 1.0 - O2ValveFrac
}
bool BreathingLoop::doExhalePurge()
{
// do nothing for now
return false;
uint32_t tnow = millis();
// purge-to-fill ratio = 0.66 => spend 66% time purging 33% filling buffer
if (tnow - _fsm_time >= static_cast<uint32_t>(0.66*_min_exhale_time) ) {
if (fabs(_targets_current->fiO2_percent - _readings_avgs.o2_percent) < 1) { // 1% tolerance
return true;
}
}
return false;
}
arduino/hev_prototype_v1/src/BreathingLoop.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef BREATHING_LOOP_H
#define BREATHING_LOOP_H
......@@ -30,8 +53,10 @@ public:
void updateReadings();
void updateRawReadings();
void updateCycleReadings();
void updateCalculations();
readings<float> getReadingAverages();
readings<float> getRawReadings();
calculations<float> getCalculations();
// float getRespiratoryRate();
float getTargetRespiratoryRate();
float getIERatio();
......@@ -50,6 +75,7 @@ public:
void setVentilationMode(VENTILATION_MODE mode);
VENTILATION_MODE getVentilationMode();
float calculateFlow(const uint32_t &current_time, const float &pressure_patient, const float &pressure_buffer, float volume_tube = 1600, float volume_buffer = 10000);
float getFlow();
float getVolume();
float getAirwayPressure();
......@@ -117,6 +143,9 @@ private:
states_durations _measured_durations = {0,0,0,0,0,0,0,0,0};
void measureDurations();
void measurePEEP();
void doO2ValveFrac(float desired_fiO2, float pressure_change);
bool doExhalePurge();
// targets
void initTargets();
target_variables _targets_pcac;
......@@ -130,6 +159,7 @@ private:
readings<float> _readings_sums; // 32 bit due to possible analog read overflow
readings<float> _readings_avgs;
readings<float> _readings_raw;
calculations<float> _calculations;
bool _readings_reset;
uint32_t _readings_N;
uint32_t _readings_time;
......@@ -140,6 +170,8 @@ private:
uint32_t _readings_cycle_timeout;
uint32_t _tsig_time;
uint32_t _tsig_timeout;
uint32_t _calculations_time;
uint32_t _calculations_timeout;
void tsigReset();
......@@ -177,6 +209,8 @@ private:
//float _pid_integral; // moved to pid_variable struct
LinearFitter _flow_fitter = LinearFitter(300, 100);
LinearFitter _pressure_buffer_fitter = LinearFitter(100,0);
LinearFitter _pressure_patient_fitter = LinearFitter(100,0);
// triggers
void runningAvgs();
bool inhaleTrigger();
......@@ -206,6 +240,10 @@ private:
uint32_t _min_exhale_time;
uint32_t _max_exhale_time;
float _o2_valve_frac;
float _expected_fiO2;
float _new_expected_fiO2;
};
......
arduino/hev_prototype_v1/src/LinearFitter.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef LINEARFITTER_H
#define LINEARFITTER_H
......@@ -54,7 +77,7 @@ public:
uint8_t linearRegression(float &slope, float &offset) {
if (_x.isEmpty() || _y.isEmpty()) return 1;
if ((_x[_entries - 1] - _x[0]) < _duration ) return 2;
//if ((_x[_entries - 1] - _x[0]) < _duration ) return 2;
if ((_entries * _sum_x2) == (_sum_x * _sum_x)) return 3;
// results
......@@ -65,7 +88,7 @@ public:
float extrapolate(uint32_t x) {
x -= _x_zero;
float slope, offset;
uint8_t linreg = linearRegression(slope, offset);
uint8_t linreg = linearRegression(slope, offset);
if (0==linreg){
return (x*slope + offset);
}
......@@ -80,10 +103,16 @@ public:
y = _y[_entries-1] ;
entries = _entries;
}
uint16_t GetEntries(){
return _entries;
}
float GetSumX2(){
return _sum_x2;
}
private:
uint32_t _x_zero = 0;
uint8_t _entries = 0;
uint16_t _entries = 0;
uint32_t _duration = 0;
uint32_t _delay = 0;
......
arduino/hev_prototype_v1/src/MemoryFree.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#if (ARDUINO >= 100)
#include <Arduino.h>
#else
......
arduino/hev_prototype_v1/src/MemoryFree.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// MemoryFree library based on code posted here:
// http://www.arduino.cc/cgi-bin/yabb2/YaBB.pl?num=1213583720/15
// Extended by Matthew Murdoch to include walking of the free list.
......
arduino/hev_prototype_v1/src/SystemUtils.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "SystemUtils.h"
SystemUtils::SystemUtils()
......
arduino/hev_prototype_v1/src/SystemUtils.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef SYSTEMUTILS_H
#define SYSTEMUTILS_H
......
arduino/hev_prototype_v1/src/UILoop.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "UILoop.h"
UILoop::UILoop(BreathingLoop *bl, AlarmLoop *al, CommsControl *comms)
......@@ -105,9 +128,12 @@ void UILoop::reportFastReadings()
_fast_data.process_pressure = pid.process_pressure;
_fast_data.valve_duty_cycle = pid.valve_duty_cycle;
_fast_data.flow = _breathing_loop->getFlow();
_fast_data.volume= _breathing_loop->getVolume();
_fast_data.airway_pressure= _breathing_loop->getAirwayPressure();
calculations<float> calc = _breathing_loop->getCalculations();
_fast_data.flow = calc.flow;
_fast_data.flow_calc = calc.flow_calc;
_fast_data.volume = calc.volume;
_fast_data.airway_pressure = calc.pressure_airway;
_pl_send.setPayload(PRIORITY::DATA_ADDR, reinterpret_cast<void *>(&_fast_data), sizeof(_fast_data));
_comms->writePayload(_pl_send);
......@@ -147,7 +173,7 @@ void UILoop::reportReadbackValues()
_readback_data.valve_exhale = vexhale;
_readback_data.valve_purge = vpurge;
_readback_data.ventilation_mode = static_cast<uint8_t>(_breathing_loop->getVentilationMode());
_readback_data.ventilation_mode = _breathing_loop->getVentilationMode();
_readback_data.valve_inhale_percent = 0;
_readback_data.valve_exhale_percent = 0;
......
arduino/hev_prototype_v1/src/UILoop.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef UI_LOOP_H
#define UI_LOOP_H
......
arduino/hev_prototype_v1/src/ValvesController.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "ValvesController.h"
ValvesController::ValvesController()
......@@ -49,7 +72,7 @@ ValvesController::ValvesController()
_valve_params.inhale_duty_cycle = 0;
_valve_params.inhale_open_max = MAX_VALVE_FRAC_OPEN;
_valve_params.inhale_open_min = 0.53;
_valve_params.inhale_open_min = 0.51;
_valve_params.valve_air_in_enable = 1;
_valve_params.valve_o2_in_enable = 1;
_valve_params.valve_purge_enable = 1;
......
arduino/hev_prototype_v1/src/ValvesController.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef VALVES_CONTROLLER_H
#define VALVES_CONTROLLER_H
......
arduino/hev_prototype_v1/src/common.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include "common.h"
CommsControl* global_comms;
......
arduino/hev_prototype_v1/src/common.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef COMMON_H
#define COMMON_H
#include <Arduino.h>
......@@ -229,6 +252,7 @@ struct fast_data_format {
uint16_t ambient_temperature = 0;
float airway_pressure = 0.0;
float flow = 0.0;
float flow_calc = 0.0;
float volume = 0.0;
float target_pressure = 0.0; //
float process_pressure = 0.0;
......@@ -664,6 +688,15 @@ template <typename T> struct readings{
T o2_percent = 0;
};
template <typename T> struct calculations {
uint32_t timestamp = 0;
T flow = 0;
T flow_calc = 0;
T volume = 0;
T pressure_airway = 0;
};
template <typename T> struct IV_readings{
uint64_t timestamp = 0; //
T inhale_current = 0;
......
arduino/hev_prototype_v1/src/localconf.example.h
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#ifndef LOCALCONF_H
#define LOCALCONF_H
......
arduino/hev_prototype_v1/src/main.cpp
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
#include <Arduino.h>
#include "common.h"
#ifdef CHIP_ESP32
......@@ -138,6 +161,7 @@ void loop()
breathing_loop.updateReadings();
breathing_loop.updateRawReadings();
breathing_loop.updateCycleReadings();
breathing_loop.updateCalculations();
// update alarm values
// TODO assign more values
alarm_loop.updateValues(breathing_loop.getReadingAverages(), breathing_loop.getCycleReadings());
......
arduino/hev_prototype_v1/test/flow_calib.py
View file @ 459c7229
#!/usr/bin/python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# from Oscar's excel sheet
......
arduino/protocol/include/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project header files.
A header file is a file containing C declarations and macro definitions
to be shared between several project source files. You request the use of a
header file in your project source file (C, C++, etc) located in `src` folder
by including it, with the C preprocessing directive `#include'.
```src/main.c
#include "header.h"
int main (void)
{
...
}
```
Including a header file produces the same results as copying the header file
into each source file that needs it. Such copying would be time-consuming
and error-prone. With a header file, the related declarations appear
in only one place. If they need to be changed, they can be changed in one
place, and programs that include the header file will automatically use the
new version when next recompiled. The header file eliminates the labor of
finding and changing all the copies as well as the risk that a failure to
find one copy will result in inconsistencies within a program.
In C, the usual convention is to give header files names that end with `.h'.
It is most portable to use only letters, digits, dashes, and underscores in
header file names, and at most one dot.
Read more about using header files in official GCC documentation:
* Include Syntax
* Include Operation
* Once-Only Headers
* Computed Includes
https://gcc.gnu.org/onlinedocs/cpp/Header-Files.html
arduino/protocol/lib/README deleted 100644 → 0
View file @ 302a5fef
This directory is intended for project specific (private) libraries.
PlatformIO will compile them to static libraries and link into executable file.
The source code of each library should be placed in a an own separate directory
("lib/your_library_name/[here are source files]").
For example, see a structure of the following two libraries `Foo` and `Bar`:
|--lib
| |
| |--Bar
| | |--docs
| | |--examples
| | |--src
| | |- Bar.c
| | |- Bar.h
| | |- library.json (optional, custom build options, etc) https://docs.platformio.org/page/librarymanager/config.html
| |
| |--Foo
| | |- Foo.c
| | |- Foo.h
| |
| |- README --> THIS FILE
|
|- platformio.ini
|--src
|- main.c
and a contents of `src/main.c`:
```
#include <Foo.h>
#include <Bar.h>
int main (void)
{
...
}
```
PlatformIO Library Dependency Finder will find automatically dependent
libraries scanning project source files.
More information about PlatformIO Library Dependency Finder
- https://docs.platformio.org/page/librarymanager/ldf.html
arduino/protocol/platformio.ini deleted 100644 → 0
View file @ 302a5fef
; PlatformIO Project Configuration File
;
; Build options: build flags, source filter
; Upload options: custom upload port, speed and extra flags
; Library options: dependencies, extra library storages
; Advanced options: extra scripting
;
; Please visit documentation for the other options and examples
; https://docs.platformio.org/page/projectconf.html
[platformio]
default_envs = uno
[env]
lib_deps =
commsControl
5390 ; uCRC16Lib
5418 ; RingBuffer
build_flags = -fpermissive -I../common/include/
lib_extra_dirs = ../common/lib
[env:uno]
platform = atmelavr
framework = arduino
board = uno
[env:mkrvidor4000]
platform = atmelsam
framework = arduino
board = mkrvidor4000
[env:featheresp32]
platform = espressif32
framework = arduino
board = featheresp32
upload_port = /dev/ttyUSB0
[env:due]
platform = atmelsam
framework = arduino
board = due
[env:yun]
platform = atmelavr
framework = arduino
board = yun
;[env:mkrwifi1010]
;platform = atmelsam
;framework = arduino
;board = mkrwifi1010
[env:nodemcu-32s]
platform = espressif32
framework = arduino
board = nodemcu-32s
arduino/protocol/platformio.pro deleted 100644 → 0
View file @ 302a5fef
win32 {
HOMEDIR += $$(USERPROFILE)
}
else {
HOMEDIR += $$(HOME)
}
INCLUDEPATH += "$${_PRO_FILE_PWD_}/include"
INCLUDEPATH += "$${_PRO_FILE_PWD_}/src"
INCLUDEPATH += "$${_PRO_FILE_PWD_}/../common/lib/commsControl"
INCLUDEPATH += "$${_PRO_FILE_PWD_}/.pio/libdeps/uno/uCRC16Lib_ID5390/src"
INCLUDEPATH += "$${_PRO_FILE_PWD_}/.pio/libdeps/uno/RingBuffer_ID5418/src"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/framework-arduino-avr/cores/arduino"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/framework-arduino-avr/variants/standard"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/framework-arduino-avr/libraries/EEPROM/src"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/framework-arduino-avr/libraries/HID/src"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/framework-arduino-avr/libraries/SPI/src"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/framework-arduino-avr/libraries/SoftwareSerial/src"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/framework-arduino-avr/libraries/Wire/src"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/toolchain-atmelavr/avr/include"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/toolchain-atmelavr/lib/gcc/avr/5.4.0/include"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/toolchain-atmelavr/lib/gcc/avr/5.4.0/include-fixed"
INCLUDEPATH += "$${HOMEDIR}/.platformio/packages/tool-unity"
DEFINES += "PLATFORMIO=40301"
DEFINES += "ARDUINO_AVR_UNO"
DEFINES += "F_CPU=16000000L"
DEFINES += "ARDUINO_ARCH_AVR"
DEFINES += "ARDUINO=10808"
DEFINES += "__AVR_ATmega328P__"
OTHER_FILES += platformio.ini
SOURCES += src/protocol.cpp \
../common/lib/commsControl/commsControl.cpp \
../common/lib/commsControl/commsFormat.cpp
HEADERS += ../common/lib/commsControl/commsConstants.h \
../common/lib/commsControl/commsControl.h \
../common/lib/commsControl/commsFormat.h
arduino/protocol/src/protocol.cpp deleted 100644 → 0
View file @ 302a5fef
#include <Arduino.h>
#include "commsControl.h"
#define LED_BLUE 5
#define LED_GREEN 7
#define LED_RED 3
#define BTN 8
payload plReceive_;
payload plSend_;
commsControl comms_;
dataFormat data_;
alarmFormat alarm_;
int currentState_ = 0;
int previousState_ = 0;
int led_ = 0;
bool blue_ = false;
bool green_ = false;
bool red_ = false;
bool enabled_ = false;
uint32_t lastTime_ = 0;
uint32_t offset_ = 10;
// dirty function to switch one of the LEDs
void switchLED(int led) {
int state = HIGH;
switch (led) {
case LED_BLUE:
if (blue_)
state = LOW;
blue_ = !blue_;
break;
case LED_RED:
if (red_)
state = LOW;
red_ = !red_;
break;
case LED_GREEN:
if (green_)
state = LOW;
green_ = !green_;
break;
}
digitalWrite(led, state);
}
void setup() {
plSend_.setType(payloadType::payloadData);
// initialize digital pin LED_BUILTIN as an output.
pinMode(LED_BLUE, OUTPUT);
pinMode(LED_GREEN, OUTPUT);
pinMode(LED_RED, OUTPUT);
pinMode(BTN, INPUT);
// initialize comms connection
comms_.beginSerial();
}
void loop() {
// testing increase of values to be sent
// will only increase the count on the button release (reasons)
currentState_ = digitalRead(BTN);
if ( currentState_ != previousState_) {
if (currentState_ != HIGH) {
switchLED(LED_BLUE);
// counter increase on button press
data_.fsm_state += 1;
plSend_.setData(&data_);
// register new data in comms
comms_.writePayload(plSend_);
}
previousState_ = currentState_;
}
if (enabled_ & (millis() > (lastTime_ + offset_)))
{
lastTime_ = millis();
plSend_.getData()->readback_valve_air_in = static_cast<uint8_t>((lastTime_ >> 24) & 0xFF);
plSend_.getData()->readback_valve_o2_in = static_cast<uint8_t>((lastTime_ >> 16) & 0xFF);
plSend_.getData()->readback_valve_inhale = static_cast<uint8_t>((lastTime_ >> 8 ) & 0xFF);
plSend_.getData()->readback_valve_exhale = static_cast<uint8_t>((lastTime_ >> 0 ) & 0xFF);
switchLED(LED_BLUE);
plSend_.setType(payloadType::payloadData);
plSend_.getData()->fsm_state += 1;
comms_.writePayload(plSend_);
}
// per cycle sender
comms_.sender();
// per cycle receiver
int x1, x2, x3 = 0;
comms_.receiver(x1,x2,x3);
if (comms_.readPayload(plReceive_)) {
switch (plReceive_.getType()) {
case payloadType::payloadCmd:
if (plReceive_.getCmd()->cmdCode % 2 == 0) {
enabled_ = false;
} else {
enabled_ = true;
}
offset_ = plReceive_.getCmd()->param;
alarm_.alarmCode = plReceive_.getCmd()->cmdCode;
alarm_.param = millis() & 0xFFFFFFFF;
plSend_.setAlarm(&alarm_);
comms_.writePayload(plSend_);
break;
default:
break;
}
plReceive_.setType(payloadType::payloadUnset);
}
}
battery/BatteryLLI.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import asyncio
import logging
......
battery/CommsCommon.py deleted 120000 → 0
View file @ 302a5fef
../raspberry-dataserver/CommsCommon.py
\ No newline at end of file
battery/CommsCommon.py 0 → 100644
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from struct import Struct
from enum import Enum, IntEnum, auto, unique
from dataclasses import dataclass, asdict, field, fields
from typing import Any, ClassVar, Dict
import logging
import binascii
logging.basicConfig(level=logging.INFO,
format='%(asctime)s - %(levelname)s - %(message)s')
# VERSIONING
# change version in PayloadFormat for all data
# i.e. if and of DataFormat, CommandFormat or AlarmFormat change
# then change the RPI_VERSION
# =======================================
# Enum definitions
# =======================================
@unique
class CMD_TYPE(Enum):
GENERAL = 1
SET_DURATION = 2
SET_MODE = 3
SET_THRESHOLD_MIN = 4
SET_THRESHOLD_MAX = 5
SET_VALVE = 6
SET_PID = 7
SET_TARGET_PC_AC = 8
SET_TARGET_PC_AC_PRVC = 9
SET_TARGET_PC_PSV = 10
SET_TARGET_CPAP = 11
SET_TARGET_TEST = 12
SET_TARGET_CURRENT = 13
GET_TARGETS = 14
SET_PERSONAL = 15
GET_THRESHOLD_MIN = 16
GET_THRESHOLD_MAX = 17
@unique
class CMD_GENERAL(Enum):
START = 1
STOP = 2
RESET = 3
STANDBY = 4
GET_PERSONAL = 5
# Taken from the FSM doc. Correct as of 1400 on 20200417
@unique
class CMD_SET_DURATION(Enum):
PRE_CALIBRATION = 1
CALIBRATION = 2
BUFF_PURGE = 3
BUFF_FLUSH = 4
BUFF_PREFILL = 5
BUFF_FILL = 6
BUFF_PRE_INHALE = 7
INHALE = 8
PAUSE = 9
EXHALE = 10
@unique
class VENTILATION_MODE(Enum):
UNKNOWN = 0
PC_AC = 1
PC_AC_PRVC = 2
PC_PSV = 3
CPAP = 4
TEST = 5
PURGE = 6
FLUSH = 7
CURRENT = 100 # not settable
@unique
class CMD_SET_VALVE(Enum):
AIR_IN_ENABLE = 1
O2_IN_ENABLE = 2
PURGE_ENABLE = 3
INHALE_DUTY_CYCLE = 4
INHALE_OPEN_MIN = 5
INHALE_OPEN_MAX = 6
INHALE_TRIGGER_ENABLE = 7
EXHALE_TRIGGER_ENABLE = 8
@unique
class CMD_SET_PID(Enum):
KP = 1
KI = 2
KD = 3
PID_GAIN = 4
TARGET_FINAL_PRESSURE = 5
NSTEPS = 6
MAX_PATIENT_PRESSURE = 7
@unique
class CMD_SET_TARGET(Enum):
INSPIRATORY_PRESSURE = 1
RESPIRATORY_RATE = 2
IE_RATIO = 3
VOLUME = 4
PEEP = 5
FIO2_PERCENT = 6
INHALE_TIME = 7
INHALE_TRIGGER_THRESHOLD = 8
EXHALE_TRIGGER_THRESHOLD = 9
#PID_GAIN = 10
# for debugging only; not for UIs
INHALE_TRIGGER_ENABLE = 11
EXHALE_TRIGGER_ENABLE = 12
VOLUME_TRIGGER_ENABLE = 13
@unique
# class CMD_SET_PERSONAL(Enum):
# NAME = 1
# AGE = 2
# SEX = 3
# HEIGHT = 4
# WEIGHT = 5
@unique
class ALARM_TYPE(Enum):
PRIORITY_LOW = 1
PRIORITY_MEDIUM = 2
PRIORITY_HIGH = 3
@unique
class ALARM_CODES(Enum):
UNKNOWN = 0
APNEA = 1 # HP
CHECK_VALVE_EXHALE = 2 # HP
CHECK_P_PATIENT = 3 # HP
EXPIRATION_SENSE_FAULT_OR_LEAK = 4 # MP
EXPIRATION_VALVE_LEAK = 5 # MP
HIGH_FIO2 = 6 # MP
HIGH_PRESSURE = 7 # HP
HIGH_RR = 8 # MP
HIGH_VTE = 9 # MP
LOW_VTE = 10 # MP
HIGH_VTI = 11 # MP
LOW_VTI = 12 # MP
INTENTIONAL_STOP = 13 # HP
LOW_BATTERY = 14 # HP (LP) if AC power isn't (is) connected
LOW_FIO2 = 15 # HP
OCCLUSION = 16 # HP
HIGH_PEEP = 17 # HP
LOW_PEEP = 18 # HP
AC_POWER_DISCONNECTION = 19 # MP
BATTERY_FAULT_SRVC = 20 # MP
BATTERY_CHARGE = 21 # MP
AIR_FAIL = 22 # HP
O2_FAIL = 23 # HP
PRESSURE_SENSOR_FAULT = 24 # HP
ARDUINO_FAIL = 25 # HP
class CMD_MAP(Enum):
GENERAL = CMD_GENERAL
SET_DURATION = CMD_SET_DURATION
SET_MODE = VENTILATION_MODE
SET_VALVE = CMD_SET_VALVE
SET_PID = CMD_SET_PID
SET_TARGET_PC_AC = CMD_SET_TARGET
SET_TARGET_PC_AC_PRVC = CMD_SET_TARGET
SET_TARGET_PC_PSV = CMD_SET_TARGET
SET_TARGET_CPAP = CMD_SET_TARGET
SET_TARGET_TEST = CMD_SET_TARGET
SET_TARGET_CURRENT = CMD_SET_TARGET
SET_THRESHOLD_MIN = ALARM_CODES
SET_THRESHOLD_MAX = ALARM_CODES
GET_THRESHOLD_MIN = ALARM_CODES
GET_THRESHOLD_MAX = ALARM_CODES
GET_TARGETS = VENTILATION_MODE
# SET_PERSONAL = CMD_SET_PERSONAL
@unique
class BL_STATES(Enum):
UNKNOWN = 0
IDLE = 1
PRE_CALIBRATION = 2
CALIBRATION = 3
BUFF_PREFILL = 4
BUFF_FILL = 5
BUFF_PRE_INHALE = 6
INHALE = 7
PAUSE = 8
EXHALE = 9
STOP = 10
BUFF_PURGE = 11
BUFF_FLUSH = 12
STANDBY = 13
@unique
class PAYLOAD_TYPE(IntEnum):
UNSET = 0
DATA = 1
READBACK = 2
CYCLE = 3
THRESHOLDS = 4
CMD = 5
ALARM = 6
DEBUG = 7
IVT = 8
LOGMSG = 9
TARGET = 10
BATTERY = 11
LOOP_STATUS = 12
PERSONAL = 13
class HEVVersionError(Exception):
pass
@dataclass
class PayloadFormat():
# class variables excluded from init args and output dict
_RPI_VERSION: ClassVar[int] = field(default=0xB6, init=False, repr=False)
_dataStruct: ClassVar[Any] = field(default=Struct("<BIB"), init=False, repr=False)
_byteArray: ClassVar[bytearray] = field(default=None, init=False, repr=False)
# Meta information
version: int = 0
timestamp: int = 0
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.UNSET
@classmethod
def fromByteArray(cls, rec_bytes):
"""Automatically determine which subclass to initialise as"""
DATA_TYPE_TO_CLASS = {
1: DataFormat,
2: ReadbackFormat,
3: CycleFormat,
#4: ThresholdFormat,
5: CommandFormat,
6: AlarmFormat,
7: DebugFormat,
8: IVTFormat,
9: LogMsgFormat,
10: TargetFormat,
11: BatteryFormat,
12: LoopStatusFormat,
13: PersonalFormat
}
ReturnType = DATA_TYPE_TO_CLASS[rec_bytes[5]]
payload_obj = ReturnType()
payload_obj.fromByteArray(rec_bytes)
return payload_obj
@property
def byteArray(self) -> bytearray:
self.toByteArray()
return self._byteArray
@byteArray.setter
def byteArray(self, byte_array) -> None:
self._byteArray = byte_array
def toByteArray(self) -> None:
self.version = self._RPI_VERSION
self._byteArray = self._dataStruct.pack(*[
v.value if isinstance(v, IntEnum) or isinstance(v, Enum) else v
for v in asdict(self).values()
])
# check for mismatch between pi and microcontroller version
def checkVersion(self):
if self._RPI_VERSION != self.version :
raise HEVVersionError('Version Mismatch', "PI:", self._RPI_VERSION, "uC:", self.version)
def getSize(self) -> int:
return len(self.byteArray)
def getType(self) -> Any:
return self.payload_type if isinstance(self.payload_type, IntEnum) else PAYLOAD_TYPE(self.payload_type)
def getDict(self) -> Dict:
return {k: v.name if isinstance(v, IntEnum) or isinstance(v, Enum) else v for k, v in asdict(self).items()}
# =======================================
# fast data payload
# =======================================
@dataclass
class DataFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBBHfHffffHfHHffffffffff")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.DATA
# subclass member variables
fsm_state: BL_STATES = BL_STATES.IDLE
pressure_air_supply: int = 0
pressure_air_regulated: float = 0.0
pressure_o2_supply: int = 0
pressure_o2_regulated: float = 0.0
pressure_buffer: float = 0.0
pressure_inhale: float = 0.0
pressure_patient: float = 0.0
temperature_buffer: int = 0
pressure_diff_patient: float = 0.0
ambient_pressure: int = 0
ambient_temperature: int = 0
airway_pressure: float = 0.0
flow: float = 0.0
flow_calc : float = 0.0
volume : float = 0.0
target_pressure : float = 0.0 ##
process_pressure: float = 0.0
valve_duty_cycle: float = 0.0
proportional : float = 0.0
integral : float = 0.0 ##
derivative : float = 0.0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_state = 0
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
tmp_state,
self.pressure_air_supply,
self.pressure_air_regulated,
self.pressure_o2_supply,
self.pressure_o2_regulated,
self.pressure_buffer,
self.pressure_inhale,
self.pressure_patient,
self.temperature_buffer,
self.pressure_diff_patient,
self.ambient_pressure,
self.ambient_temperature,
self.airway_pressure,
self.flow,
self.flow_calc,
self.volume,
self.target_pressure ,
self.process_pressure,
self.valve_duty_cycle,
self.proportional ,
self.integral ,
self.derivative
) = self._dataStruct.unpack(byteArray)
self.fsm_state = BL_STATES(tmp_state)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# readback data payload
# =======================================
@dataclass
class ReadbackFormat(PayloadFormat):
_dataStruct = Struct("<BIBHHHHHHHHHHffBBBBBBBBBBBffffffB")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.READBACK
duration_pre_calibration: int = 0
duration_calibration: int = 0
duration_buff_purge: int = 0
duration_buff_flush: int = 0
duration_buff_prefill: int = 0
duration_buff_fill: int = 0
duration_buff_pre_inhale: int = 0
duration_inhale: int = 0
duration_pause: int = 0
duration_exhale: int = 0
valve_air_in: float = 0.0
valve_o2_in: float = 0.0
valve_inhale: int = 0
valve_exhale: int = 0
valve_purge: int = 0
ventilation_mode: int = VENTILATION_MODE.PC_AC
valve_inhale_percent: int = 0
valve_exhale_percent: int = 0
valve_air_in_enable: int = 0
valve_o2_in_enable: int = 0
valve_purge_enable: int = 0
inhale_trigger_enable: int = 0
exhale_trigger_enable: int = 0
peep: float = 0.0
inhale_exhale_ratio: float = 0.0
kp : float = 0.0
ki : float = 0.0
kd : float = 0.0
pid_gain : float = 0.0
max_patient_pressure : int = 0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_mode = 0
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.duration_pre_calibration,
self.duration_calibration,
self.duration_buff_purge,
self.duration_buff_flush,
self.duration_buff_prefill,
self.duration_buff_fill,
self.duration_buff_pre_inhale,
self.duration_inhale,
self.duration_pause,
self.duration_exhale,
self.valve_air_in,
self.valve_o2_in,
self.valve_inhale,
self.valve_exhale,
self.valve_purge,
tmp_mode,
self.valve_inhale_percent,
self.valve_exhale_percent,
self.valve_air_in_enable,
self.valve_o2_in_enable,
self.valve_purge_enable,
self.inhale_trigger_enable,
self.exhale_trigger_enable,
self.peep,
self.inhale_exhale_ratio,
self.kp ,
self.ki ,
self.kd ,
self.pid_gain ,
self.max_patient_pressure
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.ventilation_mode = VENTILATION_MODE(tmp_mode)
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# cycle data payload
# =======================================
@dataclass
class CycleFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBffffffffffffffHHB")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.CYCLE
respiratory_rate: float = 0.0
tidal_volume: float = 0.0
exhaled_tidal_volume: float = 0.0
inhaled_tidal_volume: float = 0.0
minute_volume: float = 0.0
exhaled_minute_volume: float = 0.0
inhaled_minute_volume: float = 0.0
lung_compliance: float = 0.0
static_compliance: float = 0.0
inhalation_pressure: float = 0.0
peak_inspiratory_pressure: float = 0.0
plateau_pressure: float = 0.0
mean_airway_pressure: float = 0.0
fiO2_percent: float = 0.0
apnea_index: int = 0
apnea_time: int = 0
mandatory_breath: int = 0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.respiratory_rate,
self.tidal_volume,
self.exhaled_tidal_volume,
self.inhaled_tidal_volume,
self.minute_volume,
self.exhaled_minute_volume,
self.inhaled_minute_volume,
self.lung_compliance,
self.static_compliance,
self.inhalation_pressure,
self.peak_inspiratory_pressure,
self.plateau_pressure,
self.mean_airway_pressure,
self.fiO2_percent,
self.apnea_index,
self.apnea_time,
self.mandatory_breath) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# debug data payload; this can change
# =======================================
@dataclass
class DebugFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBfffffffff")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.DEBUG
kp : float = 0.0
ki : float = 0.0
kd : float = 0.0
target_pressure : float = 0.0 ##
process_pressure: float = 0.0
valve_duty_cycle: float = 0.0
proportional : float = 0.0
integral : float = 0.0 ##
derivative : float = 0.0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.kp ,
self.ki ,
self.kd ,
self.target_pressure ,
self.process_pressure,
self.valve_duty_cycle,
self.proportional ,
self.integral ,
self.derivative
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# debug data payload; this can change
# =======================================
@dataclass
class LoopStatusFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBffIIBBB")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.LOOP_STATUS
duration_loop : float = 0.0
duration_loop_max : float = 0.0
dropped_send : int = 0
dropped_receive : int = 0
buffer_alarm : int = 0
buffer_cmd : int = 0
buffer_data : int = 0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.duration_loop ,
self.duration_loop_max,
self.dropped_send ,
self.dropped_receive ,
self.buffer_alarm ,
self.buffer_cmd ,
self.buffer_data ,
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# thresholds eata payload
# =======================================
# TODO
# =======================================
# IVT data payload
# =======================================
@dataclass
class IVTFormat(PayloadFormat):
_dataStruct = Struct("<BIBffffffffffBBBBBf")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.IVT
inhale_current : float = 0.0
exhale_current : float = 0.0
purge_current : float = 0.0
air_in_current : float = 0.0
o2_in_current : float = 0.0
inhale_voltage : float = 0.0
exhale_voltage : float = 0.0
purge_voltage : float = 0.0
air_in_voltage : float = 0.0
o2_in_voltage : float = 0.0
inhale_i2caddr : int = 0.0
exhale_i2caddr : int = 0.0
purge_i2caddr : int = 0.0
air_in_i2caddr : int = 0.0
o2_in_i2caddr : int = 0.0
system_temp : float = 0.0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.inhale_current ,
self.exhale_current ,
self.purge_current ,
self.air_in_current ,
self.o2_in_current ,
self.inhale_voltage ,
self.exhale_voltage ,
self.purge_voltage ,
self.air_in_voltage ,
self.o2_in_voltage ,
self.inhale_i2caddr ,
self.exhale_i2caddr ,
self.purge_i2caddr ,
self.air_in_i2caddr ,
self.o2_in_i2caddr ,
self.system_temp
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# Target data payload
# =======================================
@dataclass
class TargetFormat(PayloadFormat):
_dataStruct = Struct("<BIBBfffffffBBBffff")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.TARGET
mode : int = 0
inspiratory_pressure : float = 0.0
ie_ratio : float = 0.0
volume : float = 0.0
respiratory_rate : float = 0.0
peep : float = 0.0
fiO2_percent : float = 0.0
inhale_time : float = 0
inhale_trigger_enable : int = 0
exhale_trigger_enable : int = 0
volume_trigger_enable : int = 0
inhale_trigger_threshold : float = 0.0
exhale_trigger_threshold : float = 0.0
buffer_upper_pressure : float = 0.0
buffer_lower_pressure : float = 0.0
#pid_gain : float = 0.0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
tmp_mode = 0
(self.version,
self.timestamp,
tmp_payload_type,
tmp_mode ,
self.inspiratory_pressure,
self.ie_ratio ,
self.volume ,
self.respiratory_rate ,
self.peep ,
self.fiO2_percent ,
self.inhale_time ,
self.inhale_trigger_enable ,
self.exhale_trigger_enable ,
self.volume_trigger_enable ,
self.inhale_trigger_threshold ,
self.exhale_trigger_threshold ,
self.buffer_upper_pressure,
self.buffer_lower_pressure
#self.pid_gain
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self.mode = VENTILATION_MODE(tmp_mode)
self._byteArray = byteArray
# =======================================
# Personal data payload
# =======================================
@dataclass
class PersonalFormat(PayloadFormat):
_dataStruct = Struct("<BIB60s20sBcBB")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.PERSONAL
name : str = ""
patient_id : str = ""
age : int = 0
sex : str = ""
height : int = 0
weight : int = 0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
tmp_name = None
tmp_id = None
tmp_sex = None
(self.version,
self.timestamp,
tmp_payload_type,
tmp_name,
tmp_id,
self.age,
tmp_sex,
self.height,
self.weight) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self.name = tmp_name.decode().rstrip('\0')
self.patient_id = tmp_id.decode().rstrip('\0')
self.sex = tmp_sex.decode()
self._byteArray = byteArray
# =======================================
# Log msg payload
# =======================================
@dataclass
class LogMsgFormat(PayloadFormat):
_dataStruct = Struct("<BIB50s")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.LOGMSG
message : str = ""
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
tmp_chararray = ""
(self.version,
self.timestamp,
tmp_payload_type,
tmp_chararray) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.message = tmp_chararray.decode('ascii')
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# BATTERY data payload
# =======================================
@dataclass
class BatteryFormat(PayloadFormat):
_dataStruct = Struct("<BIBbbbbbbb")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.BATTERY
bat : int = 0
ok : int = 0
alarm : int = 0
rdy2buf : int = 0
bat85 : int = 0
prob_elec : int = 0
dummy : int = 0
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.bat ,
self.ok ,
self.alarm ,
self.rdy2buf ,
self.bat85 ,
self.prob_elec ,
self.dummy ,
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# cmd type payload
# =======================================
@dataclass
class CommandFormat(PayloadFormat):
_dataStruct = Struct("<BIBBBf")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.CMD
cmd_type: int = 0
cmd_code: int = 0
param: float = 0.0
def fromByteArray(self, byteArray):
cmd = 0
code = 0
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
cmd,
code,
self.param) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self.cmd_type = CMD_TYPE(cmd)
self.cmd_code = CMD_MAP[self.cmd_type.name].value(code)
self._byteArray = byteArray
# =======================================
# alarm type payload
# =======================================
@dataclass
class AlarmFormat(PayloadFormat):
_dataStruct = Struct("<BIBBBf")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.ALARM
alarm_type: int = 0
alarm_code: ALARM_CODES = ALARM_CODES.UNKNOWN
param: float = 0.0
def __eq__(self, other):
return (self.alarm_type == other.alarm_type) and (self.alarm_code == other.alarm_code)
def fromByteArray(self, byteArray):
alarm = 0
priority = 0
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
priority,
alarm,
self.param) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.alarm_type = ALARM_TYPE(priority)
self.alarm_code = ALARM_CODES(alarm)
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
battery/batt_test.py
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
#!/usr/bin/python3
# Simple UPS battery checker
......
battery/hevgpio.py
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import json
class gpio:
......
raspberry-backend/CommsCommon.py deleted 120000 → 0
View file @ 302a5fef
../raspberry-dataserver/CommsCommon.py
\ No newline at end of file
raspberry-backend/CommsCommon.py 0 → 100644
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from struct import Struct
from enum import Enum, IntEnum, auto, unique
from dataclasses import dataclass, asdict, field, fields
from typing import Any, ClassVar, Dict
import logging
import binascii
logging.basicConfig(level=logging.INFO,
format='%(asctime)s - %(levelname)s - %(message)s')
# VERSIONING
# change version in PayloadFormat for all data
# i.e. if and of DataFormat, CommandFormat or AlarmFormat change
# then change the RPI_VERSION
# =======================================
# Enum definitions
# =======================================
@unique
class CMD_TYPE(Enum):
GENERAL = 1
SET_DURATION = 2
SET_MODE = 3
SET_THRESHOLD_MIN = 4
SET_THRESHOLD_MAX = 5
SET_VALVE = 6
SET_PID = 7
SET_TARGET_PC_AC = 8
SET_TARGET_PC_AC_PRVC = 9
SET_TARGET_PC_PSV = 10
SET_TARGET_CPAP = 11
SET_TARGET_TEST = 12
SET_TARGET_CURRENT = 13
GET_TARGETS = 14
SET_PERSONAL = 15
GET_THRESHOLD_MIN = 16
GET_THRESHOLD_MAX = 17
@unique
class CMD_GENERAL(Enum):
START = 1
STOP = 2
RESET = 3
STANDBY = 4
GET_PERSONAL = 5
# Taken from the FSM doc. Correct as of 1400 on 20200417
@unique
class CMD_SET_DURATION(Enum):
PRE_CALIBRATION = 1
CALIBRATION = 2
BUFF_PURGE = 3
BUFF_FLUSH = 4
BUFF_PREFILL = 5
BUFF_FILL = 6
BUFF_PRE_INHALE = 7
INHALE = 8
PAUSE = 9
EXHALE = 10
@unique
class VENTILATION_MODE(Enum):
UNKNOWN = 0
PC_AC = 1
PC_AC_PRVC = 2
PC_PSV = 3
CPAP = 4
TEST = 5
PURGE = 6
FLUSH = 7
CURRENT = 100 # not settable
@unique
class CMD_SET_VALVE(Enum):
AIR_IN_ENABLE = 1
O2_IN_ENABLE = 2
PURGE_ENABLE = 3
INHALE_DUTY_CYCLE = 4
INHALE_OPEN_MIN = 5
INHALE_OPEN_MAX = 6
INHALE_TRIGGER_ENABLE = 7
EXHALE_TRIGGER_ENABLE = 8
@unique
class CMD_SET_PID(Enum):
KP = 1
KI = 2
KD = 3
PID_GAIN = 4
TARGET_FINAL_PRESSURE = 5
NSTEPS = 6
MAX_PATIENT_PRESSURE = 7
@unique
class CMD_SET_TARGET(Enum):
INSPIRATORY_PRESSURE = 1
RESPIRATORY_RATE = 2
IE_RATIO = 3
VOLUME = 4
PEEP = 5
FIO2_PERCENT = 6
INHALE_TIME = 7
INHALE_TRIGGER_THRESHOLD = 8
EXHALE_TRIGGER_THRESHOLD = 9
#PID_GAIN = 10
# for debugging only; not for UIs
INHALE_TRIGGER_ENABLE = 11
EXHALE_TRIGGER_ENABLE = 12
VOLUME_TRIGGER_ENABLE = 13
@unique
# class CMD_SET_PERSONAL(Enum):
# NAME = 1
# AGE = 2
# SEX = 3
# HEIGHT = 4
# WEIGHT = 5
@unique
class ALARM_TYPE(Enum):
PRIORITY_LOW = 1
PRIORITY_MEDIUM = 2
PRIORITY_HIGH = 3
@unique
class ALARM_CODES(Enum):
UNKNOWN = 0
APNEA = 1 # HP
CHECK_VALVE_EXHALE = 2 # HP
CHECK_P_PATIENT = 3 # HP
EXPIRATION_SENSE_FAULT_OR_LEAK = 4 # MP
EXPIRATION_VALVE_LEAK = 5 # MP
HIGH_FIO2 = 6 # MP
HIGH_PRESSURE = 7 # HP
HIGH_RR = 8 # MP
HIGH_VTE = 9 # MP
LOW_VTE = 10 # MP
HIGH_VTI = 11 # MP
LOW_VTI = 12 # MP
INTENTIONAL_STOP = 13 # HP
LOW_BATTERY = 14 # HP (LP) if AC power isn't (is) connected
LOW_FIO2 = 15 # HP
OCCLUSION = 16 # HP
HIGH_PEEP = 17 # HP
LOW_PEEP = 18 # HP
AC_POWER_DISCONNECTION = 19 # MP
BATTERY_FAULT_SRVC = 20 # MP
BATTERY_CHARGE = 21 # MP
AIR_FAIL = 22 # HP
O2_FAIL = 23 # HP
PRESSURE_SENSOR_FAULT = 24 # HP
ARDUINO_FAIL = 25 # HP
class CMD_MAP(Enum):
GENERAL = CMD_GENERAL
SET_DURATION = CMD_SET_DURATION
SET_MODE = VENTILATION_MODE
SET_VALVE = CMD_SET_VALVE
SET_PID = CMD_SET_PID
SET_TARGET_PC_AC = CMD_SET_TARGET
SET_TARGET_PC_AC_PRVC = CMD_SET_TARGET
SET_TARGET_PC_PSV = CMD_SET_TARGET
SET_TARGET_CPAP = CMD_SET_TARGET
SET_TARGET_TEST = CMD_SET_TARGET
SET_TARGET_CURRENT = CMD_SET_TARGET
SET_THRESHOLD_MIN = ALARM_CODES
SET_THRESHOLD_MAX = ALARM_CODES
GET_THRESHOLD_MIN = ALARM_CODES
GET_THRESHOLD_MAX = ALARM_CODES
GET_TARGETS = VENTILATION_MODE
# SET_PERSONAL = CMD_SET_PERSONAL
@unique
class BL_STATES(Enum):
UNKNOWN = 0
IDLE = 1
PRE_CALIBRATION = 2
CALIBRATION = 3
BUFF_PREFILL = 4
BUFF_FILL = 5
BUFF_PRE_INHALE = 6
INHALE = 7
PAUSE = 8
EXHALE = 9
STOP = 10
BUFF_PURGE = 11
BUFF_FLUSH = 12
STANDBY = 13
@unique
class PAYLOAD_TYPE(IntEnum):
UNSET = 0
DATA = 1
READBACK = 2
CYCLE = 3
THRESHOLDS = 4
CMD = 5
ALARM = 6
DEBUG = 7
IVT = 8
LOGMSG = 9
TARGET = 10
BATTERY = 11
LOOP_STATUS = 12
PERSONAL = 13
class HEVVersionError(Exception):
pass
@dataclass
class PayloadFormat():
# class variables excluded from init args and output dict
_RPI_VERSION: ClassVar[int] = field(default=0xB6, init=False, repr=False)
_dataStruct: ClassVar[Any] = field(default=Struct("<BIB"), init=False, repr=False)
_byteArray: ClassVar[bytearray] = field(default=None, init=False, repr=False)
# Meta information
version: int = 0
timestamp: int = 0
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.UNSET
@classmethod
def fromByteArray(cls, rec_bytes):
"""Automatically determine which subclass to initialise as"""
DATA_TYPE_TO_CLASS = {
1: DataFormat,
2: ReadbackFormat,
3: CycleFormat,
#4: ThresholdFormat,
5: CommandFormat,
6: AlarmFormat,
7: DebugFormat,
8: IVTFormat,
9: LogMsgFormat,
10: TargetFormat,
11: BatteryFormat,
12: LoopStatusFormat,
13: PersonalFormat
}
ReturnType = DATA_TYPE_TO_CLASS[rec_bytes[5]]
payload_obj = ReturnType()
payload_obj.fromByteArray(rec_bytes)
return payload_obj
@property
def byteArray(self) -> bytearray:
self.toByteArray()
return self._byteArray
@byteArray.setter
def byteArray(self, byte_array) -> None:
self._byteArray = byte_array
def toByteArray(self) -> None:
self.version = self._RPI_VERSION
self._byteArray = self._dataStruct.pack(*[
v.value if isinstance(v, IntEnum) or isinstance(v, Enum) else v
for v in asdict(self).values()
])
# check for mismatch between pi and microcontroller version
def checkVersion(self):
if self._RPI_VERSION != self.version :
raise HEVVersionError('Version Mismatch', "PI:", self._RPI_VERSION, "uC:", self.version)
def getSize(self) -> int:
return len(self.byteArray)
def getType(self) -> Any:
return self.payload_type if isinstance(self.payload_type, IntEnum) else PAYLOAD_TYPE(self.payload_type)
def getDict(self) -> Dict:
return {k: v.name if isinstance(v, IntEnum) or isinstance(v, Enum) else v for k, v in asdict(self).items()}
# =======================================
# fast data payload
# =======================================
@dataclass
class DataFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBBHfHffffHfHHffffffffff")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.DATA
# subclass member variables
fsm_state: BL_STATES = BL_STATES.IDLE
pressure_air_supply: int = 0
pressure_air_regulated: float = 0.0
pressure_o2_supply: int = 0
pressure_o2_regulated: float = 0.0
pressure_buffer: float = 0.0
pressure_inhale: float = 0.0
pressure_patient: float = 0.0
temperature_buffer: int = 0
pressure_diff_patient: float = 0.0
ambient_pressure: int = 0
ambient_temperature: int = 0
airway_pressure: float = 0.0
flow: float = 0.0
flow_calc : float = 0.0
volume : float = 0.0
target_pressure : float = 0.0 ##
process_pressure: float = 0.0
valve_duty_cycle: float = 0.0
proportional : float = 0.0
integral : float = 0.0 ##
derivative : float = 0.0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_state = 0
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
tmp_state,
self.pressure_air_supply,
self.pressure_air_regulated,
self.pressure_o2_supply,
self.pressure_o2_regulated,
self.pressure_buffer,
self.pressure_inhale,
self.pressure_patient,
self.temperature_buffer,
self.pressure_diff_patient,
self.ambient_pressure,
self.ambient_temperature,
self.airway_pressure,
self.flow,
self.flow_calc,
self.volume,
self.target_pressure ,
self.process_pressure,
self.valve_duty_cycle,
self.proportional ,
self.integral ,
self.derivative
) = self._dataStruct.unpack(byteArray)
self.fsm_state = BL_STATES(tmp_state)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# readback data payload
# =======================================
@dataclass
class ReadbackFormat(PayloadFormat):
_dataStruct = Struct("<BIBHHHHHHHHHHffBBBBBBBBBBBffffffB")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.READBACK
duration_pre_calibration: int = 0
duration_calibration: int = 0
duration_buff_purge: int = 0
duration_buff_flush: int = 0
duration_buff_prefill: int = 0
duration_buff_fill: int = 0
duration_buff_pre_inhale: int = 0
duration_inhale: int = 0
duration_pause: int = 0
duration_exhale: int = 0
valve_air_in: float = 0.0
valve_o2_in: float = 0.0
valve_inhale: int = 0
valve_exhale: int = 0
valve_purge: int = 0
ventilation_mode: int = VENTILATION_MODE.PC_AC
valve_inhale_percent: int = 0
valve_exhale_percent: int = 0
valve_air_in_enable: int = 0
valve_o2_in_enable: int = 0
valve_purge_enable: int = 0
inhale_trigger_enable: int = 0
exhale_trigger_enable: int = 0
peep: float = 0.0
inhale_exhale_ratio: float = 0.0
kp : float = 0.0
ki : float = 0.0
kd : float = 0.0
pid_gain : float = 0.0
max_patient_pressure : int = 0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_mode = 0
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.duration_pre_calibration,
self.duration_calibration,
self.duration_buff_purge,
self.duration_buff_flush,
self.duration_buff_prefill,
self.duration_buff_fill,
self.duration_buff_pre_inhale,
self.duration_inhale,
self.duration_pause,
self.duration_exhale,
self.valve_air_in,
self.valve_o2_in,
self.valve_inhale,
self.valve_exhale,
self.valve_purge,
tmp_mode,
self.valve_inhale_percent,
self.valve_exhale_percent,
self.valve_air_in_enable,
self.valve_o2_in_enable,
self.valve_purge_enable,
self.inhale_trigger_enable,
self.exhale_trigger_enable,
self.peep,
self.inhale_exhale_ratio,
self.kp ,
self.ki ,
self.kd ,
self.pid_gain ,
self.max_patient_pressure
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.ventilation_mode = VENTILATION_MODE(tmp_mode)
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# cycle data payload
# =======================================
@dataclass
class CycleFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBffffffffffffffHHB")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.CYCLE
respiratory_rate: float = 0.0
tidal_volume: float = 0.0
exhaled_tidal_volume: float = 0.0
inhaled_tidal_volume: float = 0.0
minute_volume: float = 0.0
exhaled_minute_volume: float = 0.0
inhaled_minute_volume: float = 0.0
lung_compliance: float = 0.0
static_compliance: float = 0.0
inhalation_pressure: float = 0.0
peak_inspiratory_pressure: float = 0.0
plateau_pressure: float = 0.0
mean_airway_pressure: float = 0.0
fiO2_percent: float = 0.0
apnea_index: int = 0
apnea_time: int = 0
mandatory_breath: int = 0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.respiratory_rate,
self.tidal_volume,
self.exhaled_tidal_volume,
self.inhaled_tidal_volume,
self.minute_volume,
self.exhaled_minute_volume,
self.inhaled_minute_volume,
self.lung_compliance,
self.static_compliance,
self.inhalation_pressure,
self.peak_inspiratory_pressure,
self.plateau_pressure,
self.mean_airway_pressure,
self.fiO2_percent,
self.apnea_index,
self.apnea_time,
self.mandatory_breath) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# debug data payload; this can change
# =======================================
@dataclass
class DebugFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBfffffffff")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.DEBUG
kp : float = 0.0
ki : float = 0.0
kd : float = 0.0
target_pressure : float = 0.0 ##
process_pressure: float = 0.0
valve_duty_cycle: float = 0.0
proportional : float = 0.0
integral : float = 0.0 ##
derivative : float = 0.0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.kp ,
self.ki ,
self.kd ,
self.target_pressure ,
self.process_pressure,
self.valve_duty_cycle,
self.proportional ,
self.integral ,
self.derivative
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# debug data payload; this can change
# =======================================
@dataclass
class LoopStatusFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBffIIBBB")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.LOOP_STATUS
duration_loop : float = 0.0
duration_loop_max : float = 0.0
dropped_send : int = 0
dropped_receive : int = 0
buffer_alarm : int = 0
buffer_cmd : int = 0
buffer_data : int = 0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.duration_loop ,
self.duration_loop_max,
self.dropped_send ,
self.dropped_receive ,
self.buffer_alarm ,
self.buffer_cmd ,
self.buffer_data ,
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# thresholds eata payload
# =======================================
# TODO
# =======================================
# IVT data payload
# =======================================
@dataclass
class IVTFormat(PayloadFormat):
_dataStruct = Struct("<BIBffffffffffBBBBBf")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.IVT
inhale_current : float = 0.0
exhale_current : float = 0.0
purge_current : float = 0.0
air_in_current : float = 0.0
o2_in_current : float = 0.0
inhale_voltage : float = 0.0
exhale_voltage : float = 0.0
purge_voltage : float = 0.0
air_in_voltage : float = 0.0
o2_in_voltage : float = 0.0
inhale_i2caddr : int = 0.0
exhale_i2caddr : int = 0.0
purge_i2caddr : int = 0.0
air_in_i2caddr : int = 0.0
o2_in_i2caddr : int = 0.0
system_temp : float = 0.0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.inhale_current ,
self.exhale_current ,
self.purge_current ,
self.air_in_current ,
self.o2_in_current ,
self.inhale_voltage ,
self.exhale_voltage ,
self.purge_voltage ,
self.air_in_voltage ,
self.o2_in_voltage ,
self.inhale_i2caddr ,
self.exhale_i2caddr ,
self.purge_i2caddr ,
self.air_in_i2caddr ,
self.o2_in_i2caddr ,
self.system_temp
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# Target data payload
# =======================================
@dataclass
class TargetFormat(PayloadFormat):
_dataStruct = Struct("<BIBBfffffffBBBffff")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.TARGET
mode : int = 0
inspiratory_pressure : float = 0.0
ie_ratio : float = 0.0
volume : float = 0.0
respiratory_rate : float = 0.0
peep : float = 0.0
fiO2_percent : float = 0.0
inhale_time : float = 0
inhale_trigger_enable : int = 0
exhale_trigger_enable : int = 0
volume_trigger_enable : int = 0
inhale_trigger_threshold : float = 0.0
exhale_trigger_threshold : float = 0.0
buffer_upper_pressure : float = 0.0
buffer_lower_pressure : float = 0.0
#pid_gain : float = 0.0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
tmp_mode = 0
(self.version,
self.timestamp,
tmp_payload_type,
tmp_mode ,
self.inspiratory_pressure,
self.ie_ratio ,
self.volume ,
self.respiratory_rate ,
self.peep ,
self.fiO2_percent ,
self.inhale_time ,
self.inhale_trigger_enable ,
self.exhale_trigger_enable ,
self.volume_trigger_enable ,
self.inhale_trigger_threshold ,
self.exhale_trigger_threshold ,
self.buffer_upper_pressure,
self.buffer_lower_pressure
#self.pid_gain
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self.mode = VENTILATION_MODE(tmp_mode)
self._byteArray = byteArray
# =======================================
# Personal data payload
# =======================================
@dataclass
class PersonalFormat(PayloadFormat):
_dataStruct = Struct("<BIB60s20sBcBB")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.PERSONAL
name : str = ""
patient_id : str = ""
age : int = 0
sex : str = ""
height : int = 0
weight : int = 0
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
tmp_name = None
tmp_id = None
tmp_sex = None
(self.version,
self.timestamp,
tmp_payload_type,
tmp_name,
tmp_id,
self.age,
tmp_sex,
self.height,
self.weight) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self.name = tmp_name.decode().rstrip('\0')
self.patient_id = tmp_id.decode().rstrip('\0')
self.sex = tmp_sex.decode()
self._byteArray = byteArray
# =======================================
# Log msg payload
# =======================================
@dataclass
class LogMsgFormat(PayloadFormat):
_dataStruct = Struct("<BIB50s")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.LOGMSG
message : str = ""
# for receiving DataFormat from microcontroller
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
#logging.info(f"bytearray size {len(byteArray)} ")
#logging.info(binascii.hexlify(byteArray))
tmp_payload_type = 0
tmp_chararray = ""
(self.version,
self.timestamp,
tmp_payload_type,
tmp_chararray) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.message = tmp_chararray.decode('ascii')
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# BATTERY data payload
# =======================================
@dataclass
class BatteryFormat(PayloadFormat):
_dataStruct = Struct("<BIBbbbbbbb")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.BATTERY
bat : int = 0
ok : int = 0
alarm : int = 0
rdy2buf : int = 0
bat85 : int = 0
prob_elec : int = 0
dummy : int = 0
# fill the struct from a byteArray,
def fromByteArray(self, byteArray):
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
self.bat ,
self.ok ,
self.alarm ,
self.rdy2buf ,
self.bat85 ,
self.prob_elec ,
self.dummy ,
) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
# =======================================
# cmd type payload
# =======================================
@dataclass
class CommandFormat(PayloadFormat):
_dataStruct = Struct("<BIBBBf")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.CMD
cmd_type: int = 0
cmd_code: int = 0
param: float = 0.0
def fromByteArray(self, byteArray):
cmd = 0
code = 0
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
cmd,
code,
self.param) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self.cmd_type = CMD_TYPE(cmd)
self.cmd_code = CMD_MAP[self.cmd_type.name].value(code)
self._byteArray = byteArray
# =======================================
# alarm type payload
# =======================================
@dataclass
class AlarmFormat(PayloadFormat):
_dataStruct = Struct("<BIBBBf")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.ALARM
alarm_type: int = 0
alarm_code: ALARM_CODES = ALARM_CODES.UNKNOWN
param: float = 0.0
def __eq__(self, other):
return (self.alarm_type == other.alarm_type) and (self.alarm_code == other.alarm_code)
def fromByteArray(self, byteArray):
alarm = 0
priority = 0
tmp_payload_type = 0
(self.version,
self.timestamp,
tmp_payload_type,
priority,
alarm,
self.param) = self._dataStruct.unpack(byteArray)
self.checkVersion()
self.alarm_type = ALARM_TYPE(priority)
self.alarm_code = ALARM_CODES(alarm)
self.payload_type = PAYLOAD_TYPE(tmp_payload_type)
self._byteArray = byteArray
raspberry-backend/app.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# Python monitoring code
# USAGE: python3 app.py
......
raspberry-backend/arduino_recorder.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# HEV monitoring application
# USAGE: python3 arduino_recorder.py
......
raspberry-backend/base.html
View file @ 459c7229
<!DOCTYPE html>
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
<html lang="en" class="{{'no-scroll-lock' if logs_active}}">
<head>
<meta charset="utf-8" />
......
raspberry-backend/database_dump.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# HEV database dump for debugging
# USAGE: python3 database_dump.py -db database/HEV_monitoringDB.sqlite --start_date=20200408-1834
......
raspberry-backend/hev.wsgi
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import sys
import os
sys.path.insert(0, os.path.dirname(__file__))
from app import WEBAPP as application
\ No newline at end of file
from app import WEBAPP as application
raspberry-backend/hevclient.py deleted 120000 → 0
View file @ 302a5fef
../raspberry-dataserver/hevclient.py
\ No newline at end of file
raspberry-backend/hevclient.py 0 → 100755
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# client side for the data server to manage comms between UIs and LLI
#
# Author: Dónal Murray <donal.murray@cern.ch>
import asyncio
import time
import json
import threading
from typing import List, Dict, Union
from CommsCommon import PayloadFormat, PAYLOAD_TYPE
import logging
logging.basicConfig(level=logging.INFO,
format='%(asctime)s - %(levelname)s - %(message)s')
# use /dev/shm (in memory tmpfs) to hold the data, should be stable over Flask shenanigans when restaring scripts
import mmap
import pickle
import os
mmFileName = "/dev/shm/HEVClient_lastData.mmap"
class HEVPacketError(Exception):
pass
class HEVClient(object):
def __init__(self, polling=True):
self._alarms = [] # db for alarms
self._personal = None # db for personal data
self._fastdata = None # db for sensor values
self._readback = None # db for sensor values
self._cycle = None # db for sensor values
self._target = None # db for sensor values
self._thresholds = None # db for sensor values
self._thresholds = [] # db for threshold settings
self._polling = polling # keep reading data into db
self._lock = threading.Lock() # lock for the database
self._mmFile = None
if( os.access( mmFileName, os.F_OK ) ):
self._mmFile = open(mmFileName, "a+b")
else:
self._mmFile = open(mmFileName, "x+b")
self._mmFile.write(b'0' * 10000) # ~10kb is enough I hope for one event
self._mmMap = mmap.mmap(self._mmFile.fileno(), 0) # Map to in memory object
self._mmMap.seek(0)
self._mmMap.write(pickle.dumps('Data not yet set')) # ensure no old or unset data in file
self._mmMap.flush()
# start polling in another thread unless told otherwise
if self._polling:
self.start_polling()
def __del__(self):
self._mmMap.close()
self._mmFile.close()
def start_polling(self):
"""start worker thread to update db in the background"""
worker = threading.Thread(target=self.start_client, daemon=True)
worker.start()
def start_client(self) -> None:
asyncio.run(self.polling())
async def polling(self) -> None:
"""open persistent connection with server"""
while True:
try:
reader, writer = await asyncio.open_connection("127.0.0.1", 54320)
# grab data from the socket as soon as it is available and dump it in the db
while self._polling:
try:
data = await reader.readuntil(separator=b'\0')
data = data[:-1] # snip off nullbyte
payload = json.loads(data.decode("utf-8"))
if payload["type"] == "keepalive":
#Still alive
continue
elif payload["type"] == "DATA":
with self._lock:
self._fastdata = payload["DATA"]
self._mmMap.seek(0)
self._mmMap.write(pickle.dumps(self._fastdata))
self._mmMap.flush()
elif payload["type"] == "READBACK":
with self._lock:
self._readback = payload["READBACK"]
elif payload["type"] == "CYCLE":
with self._lock:
self._cycle = payload["CYCLE"]
elif payload["type"] == "TARGET":
with self._lock:
self._target = payload["TARGET"]
elif payload["type"] == "PERSONAL":
with self._lock:
self._personal = payload["PERSONAL"]
elif payload["type"] == "THRESHOLDS":
with self._lock:
self._thresholds = payload["THRESHOLDS"]
elif payload["type"] == "ALARM":
with self._lock:
self._alarms = payload["ALARM"]
elif payload["type"] in [pt.name for pt in PAYLOAD_TYPE]:
# payload type is a valid payload type
pass
else:
raise HEVPacketError("Invalid broadcast type")
self._alarms = payload["alarms"]
#self._personal = payload["personal"]
self.get_updates(payload) # callback function to be overridden
except json.decoder.JSONDecodeError:
logging.warning(f"Could not decode packet: {data}")
except KeyError:
raise
# close connection
writer.close()
await writer.wait_closed()
except Exception as e:
# warn and reopen connection
logging.error(e)
await asyncio.sleep(2)
def get_updates(self, payload) -> None:
"""Overrideable function called after receiving data from the socket, with that data as an argument"""
pass
async def send_request(self, reqtype, cmdtype:str=None, cmd: str=None, param: str=None, alarm: str=None, personal: str=None) -> bool:
# open connection and send packet
reader, writer = await asyncio.open_connection("127.0.0.1", 54321)
payload = {"type": reqtype}
if reqtype == "CMD":
payload["cmdtype"] = cmdtype
payload["cmd"] = cmd
payload["param"] = param
elif reqtype == "ALARM":
payload["alarm_type"] = alarm["alarm_type"]
payload["alarm_code"] = alarm["alarm_code"]
payload["param"] = param
elif reqtype == "PERSONAL":
payload["name"] = personal["name"]
payload["age"] = int(personal["age"])
payload["sex"] = personal["sex"]
payload["height"] = int(personal["height"])
payload["weight"] = int(personal["weight"])
else:
raise HEVPacketError("Invalid packet type")
logging.info(payload)
packet = json.dumps(payload).encode() + b'\0'
writer.write(packet)
await writer.drain()
# wait for acknowledge
data = await reader.readuntil(separator=b'\0')
data = data[:-1]
try:
data = json.loads(data.decode("utf-8"))
except json.decoder.JSONDecodeError:
logging.warning(f"Could not decode packet: {data}")
# close connection to free up socket
writer.close()
await writer.wait_closed()
# check that acknowledge is meaningful
if data["type"] == "ack":
logging.info(f"Request type {reqtype} sent successfully")
return True
else:
logging.warning(f"Request type {reqtype} failed")
return False
def send_cmd(self, cmdtype:str, cmd: str, param: Union[float,int]=None) -> bool:
# send a cmd and wait to see if it's valid
#print(cmdtype, cmd, param)
return asyncio.run(self.send_request("CMD", cmdtype=cmdtype, cmd=cmd, param=param))
def ack_alarm(self, alarm: str) -> bool:
# acknowledge alarm to remove it from the hevserver list
return asyncio.run(self.send_request("ALARM", alarm=alarm))
#def send_personal(self, personal: Dict[str, str]=None ) -> bool:
def send_personal(self, personal: str) -> bool:
# acknowledge alarm to remove it from the hevserver list
return asyncio.run(self.send_request("PERSONAL", personal=personal))
def get_values(self) -> Dict:
# get sensor values from db
self._mmFile.seek(0)
try:
fastdata = pickle.load(self._mmFile)
except pickle.UnpicklingError as e:
logging.warning(f"Unpicking error {e}")
return None
if(type(fastdata) is dict):
return fastdata
else:
logging.warning("Missing fastdata")
return None
def get_readback(self) -> Dict:
# get readback from db
return self._readback
def get_cycle(self) -> Dict:
# get cycle data from db
return self._cycle
def get_personal(self) -> Dict:
# get personal data from db
return self._personal
def get_target(self) -> Dict:
# get target data from db
return self._target
def get_thresholds(self) -> Dict:
# get threshold data from db
return self._thresholds
def get_alarms(self) -> List[str]:
# get alarms from db
return self._alarms
if __name__ == "__main__":
# example implementation
# just import hevclient and do something like the following
hevclient = HEVClient()
time.sleep(2)
print(hevclient.send_cmd("GENERAL", "START"))
# Play with sensor values and alarms
for i in range(20):
values = hevclient.get_values() # returns a dict or None
alarms = hevclient.get_alarms() # returns a list of alarms currently ongoing
print(values)
if values is None:
i = i+1 if i > 0 else 0
else:
print(f"Values: {json.dumps(values, indent=4)}")
print(f"Alarms: {alarms}")
time.sleep(1)
# acknowledge the oldest alarm
try:
hevclient.ack_alarm(alarms[0]) # blindly assume we have one after 40s
except:
logging.info("No alarms received")
time.sleep(2)
print(f"Alarms: {hevclient.get_alarms()}")
# set a timeout
hevclient.send_cmd("SET_DURATION", "INHALE", 1111)
# check for the readback
for i in range(10):
print(f"Readback: {json.dumps(hevclient.get_readback(), indent=4)}")
print(f"Alarms: {hevclient.get_alarms()}")
time.sleep(1)
print(hevclient.send_cmd("GENERAL", "STOP"))
raspberry-backend/static/js/Chart-display.js
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// place to hard code chart parameters (can not make a separate .js as import of js not supported)
function chartParam(chartName) {
......
raspberry-backend/static/js/Chart-display2.js
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
var chart_pressure;
var chart_flow;
var chart_volume;
......
raspberry-backend/static/js/Chart-displayLoop.js
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
// to quote the AAMI:
//For Pressure-Volume loops, the graph
//is required to use delivered volume on the vertical axis
......
raspberry-backend/static/js/Chart-plot.js
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
var chart;
var refreshIntervalId;
var updateRefreshIntervalId;
......
raspberry-backend/static/js/HevUpdater.js
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
var pause_charts = false;
var current_timestamp = -1;
......
raspberry-backend/templates/base.html
View file @ 459c7229
<!DOCTYPE html>
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
<html lang="en" class="{{'no-scroll-lock' if logs_active}}">
<head>
<meta charset="utf-8" />
......
raspberry-backend/templates/charts.html
View file @ 459c7229
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
{% set charts_active = True %}
{% extends 'base.html' %}
......
raspberry-backend/templates/charts2.html
View file @ 459c7229
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
{% set charts_active = True %}
{% extends 'base.html' %}
......
raspberry-backend/templates/chartsLoop.html
View file @ 459c7229
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
{% set chartsLoop_active = True %}
{% extends 'base.html' %}
{% block content %}
......
raspberry-backend/templates/index.html
View file @ 459c7229
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
{% set fan_active = True %}
{% extends 'base.html' %}
......
raspberry-backend/templates/index_prototype.html
View file @ 459c7229
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
{% set prototype_active = True %}
{% extends 'base.html' %}
......
raspberry-backend/templates/logs.html
View file @ 459c7229
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
{% set logs_active = True %}
{% extends 'base.html' %}
......
raspberry-backend/templates/settings.html
View file @ 459c7229
<!--
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
-->
{% set settings_active = True %}
{% extends 'base.html' %}
......
raspberry-dataserver/ArduinoEmulator.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import asyncio
import logging
......
raspberry-dataserver/BatteryLLI.py deleted 120000 → 0
View file @ 302a5fef
../battery/BatteryLLI.py
\ No newline at end of file
raspberry-dataserver/BatteryLLI.py 0 → 100755
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import asyncio
import logging
import copy
from CommsCommon import BatteryFormat
# Set up logging
logging.basicConfig(format='%(asctime)s - %(levelname)s - %(message)s')
logging.getLogger().setLevel(logging.WARNING)
try:
import RPi.GPIO as gpio
except ModuleNotFoundError:
logging.warning("RPi gpio backend not found, will use dummy")
from hevgpio import gpio
gpio = gpio()
class BatteryLLI:
def __init__(self, timeout=1, dump=False):
super().__init__()
self._timeout = timeout
self._pins = {"bat" : 5,
"ok" : 6,
"alarm" : 12,
"rdy2buf" : 13,
"bat85" : 19,
"prob_elec": 7}
self._dump = dump
self._dumpfile = "share/battdump.dict"
self._dumpdata = None
if self._dump:
with open(self._dumpfile, 'w'):
pass
self._dummy = False
self.queue = asyncio.Queue()
try:
if gpio.DUMMY:
self._dummy = True
except:
pass
gpio.setmode(gpio.BCM)
for pin in self._pins:
gpio.setup(self._pins[pin], gpio.IN, pull_up_down=gpio.PUD_DOWN)
async def main(self) -> None:
while True:
await asyncio.sleep(self._timeout)
payload = BatteryFormat(dummy=self._dummy)
try:
for pin in self._pins:
setattr(payload, pin, gpio.input(self._pins[pin]))
self.queue.put_nowait(payload)
except asyncio.queues.QueueFull:
try:
self.queue.get_nowait()
self.queue.task_done()
self.queue.put_nowait(payload)
except Exception as e:
# Queue is being written from somewhere else. won't get here
logging.error(e)
continue
except Exception as e:
logging.error(f"Failed gpio data save: {e}")
continue
finally:
logging.debug(payload)
if self._dump == True:
with open(self._dumpfile, 'a') as f:
f.write(f"{payload.getDict()}\n")
if __name__ == "__main__":
try:
# schedule async tasks
loop = asyncio.get_event_loop()
# setup serial devices
battery = BatteryLLI()
asyncio.gather(battery.main(), return_exceptions=True)
loop.run_forever()
except asyncio.CancelledError:
pass
except KeyboardInterrupt:
logging.info("Closing LLI")
finally:
loop.close()
raspberry-dataserver/ClientDebug.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import asyncio
import logging
logging.basicConfig(level=logging.WARNING, format='%(asctime)s - %(levelname)s - %(message)s')
......@@ -20,8 +43,8 @@ class ClientPlots(QtWidgets.QMainWindow):
def __init__(self, light=False, port=54322, *args, **kwargs):
super(ClientPlots, self).__init__(*args, **kwargs)
self.history_length = 300
self.xrange = 300
self.history_length = 1000
self.xrange = 1000
self.port = port
self.setWindowTitle("HEV socket debug")
......@@ -37,9 +60,14 @@ class ClientPlots(QtWidgets.QMainWindow):
self.graphWidget.nextRow()
self.timestamp = list(el*(-1) for el in range(self.history_length))[::-1]
self.PID_P = list(0 for _ in range(self.history_length))
self.PID_I = list(0 for _ in range(self.history_length))
self.PID_D = list(0 for _ in range(self.history_length))
# define plots here
self.names1 = ["flow", "flow_calc"]
self.names2 = ["volume"]
self.names3 = ["pressure_patient", "pressure_buffer"]
self.data1 = {name:list(0 for _ in range(self.history_length)) for name in self.names1}
self.data2 = {name:list(0 for _ in range(self.history_length)) for name in self.names2}
self.data3 = {name:list(0 for _ in range(self.history_length)) for name in self.names3}
if light:
# light theme
......@@ -48,6 +76,10 @@ class ClientPlots(QtWidgets.QMainWindow):
# dark theme
self.graphWidget.setBackground(mkColor(30,30,30))
# Add legend
self.flowPlot.addLegend()
self.volumePlot.addLegend()
self.pressurePlot.addLegend()
# Add grid
self.flowPlot.showGrid(x=True, y=True)
self.volumePlot.showGrid(x=True, y=True)
......@@ -60,9 +92,9 @@ class ClientPlots(QtWidgets.QMainWindow):
self.volumePlot.enableAutoRange('y', True)
self.pressurePlot.enableAutoRange('y', True)
# Plot styles
self.line1 = self.plot(self.flowPlot, self.timestamp, self.PID_D, "Flow", "00F")
self.line2 = self.plot(self.volumePlot, self.timestamp, self.PID_I, "Volume", "707")
self.line3 = self.plot(self.pressurePlot, self.timestamp, self.PID_P, "Airway Pressure", "077")
self.line1 = {self.names1[idx]:self.plot(self.flowPlot , self.timestamp, self.data1[self.names1[idx]], self.names1[idx], "00F", idx) for idx in range(len(self.names1))}
self.line2 = {self.names2[idx]:self.plot(self.volumePlot , self.timestamp, self.data2[self.names2[idx]], self.names2[idx], "707", idx) for idx in range(len(self.names2))}
self.line3 = {self.names3[idx]:self.plot(self.pressurePlot, self.timestamp, self.data3[self.names3[idx]], self.names3[idx], "077", idx) for idx in range(len(self.names3))}
# get data in another thread
self.worker = threading.Thread(target=self.polling, daemon=True)
......@@ -86,9 +118,10 @@ class ClientPlots(QtWidgets.QMainWindow):
finally:
loop.close()
def plot(self, canvas, x, y, plotname, color):
pen = pg.mkPen(color=color, width=3)
return canvas.plot(x, y, name=plotname, pen=pen)
def plot(self, canvas, x, y, plotname, color, idx = 0):
styles = [QtCore.Qt.SolidLine, QtCore.Qt.DashLine, QtCore.Qt.DotLine]
pen = pg.mkPen(color=color, width=3, style=styles[idx%3])
return canvas.plot(x, y, name=plotname, pen=pen)
async def redraw(self):
while True:
......@@ -109,16 +142,18 @@ class ClientPlots(QtWidgets.QMainWindow):
if brtype == "DATA":
self.statusBar().showMessage(f"Got data for timestamp {payload['timestamp']}")
logging.info("data acquired")
self.PID_D.append(payload["flow"])
self.PID_I.append(payload["volume"])
self.PID_P.append(payload["pressure_patient"])
if len(self.PID_D) > self.history_length:
self.PID_D = self.PID_D[1:]
self.PID_I = self.PID_I[1:]
self.PID_P = self.PID_P[1:]
self.line1.setData(self.timestamp, self.PID_D)
self.line2.setData(self.timestamp, self.PID_I)
self.line3.setData(self.timestamp, self.PID_P)
for name in self.names1:
self.data1[name].append(payload[name])
self.data1[name] = self.data1[name][1:]
self.line1[name].setData(self.timestamp, self.data1[name])
for name in self.names2:
self.data2[name].append(payload[name])
self.data2[name] = self.data2[name][1:]
self.line2[name].setData(self.timestamp, self.data2[name])
for name in self.names3:
self.data3[name].append(payload[name])
self.data3[name] = self.data3[name][1:]
self.line3[name].setData(self.timestamp, self.data3[name])
elif brtype == "READBACK":
pass
elif brtype == "CYCLE":
......@@ -131,11 +166,15 @@ class ClientPlots(QtWidgets.QMainWindow):
logging.info("personal data acquired")
pass
elif brtype == "ALARM":
logging.error(f"received ALARM {payload}")
logging.debug(f"received ALARM {payload}")
elif brtype == "IVT":
pass
elif brtype == "DEBUG":
pass
elif brtype == "BATTERY":
pass
elif brtype == "CMD":
pass
else:
raise KeyError
......
raspberry-dataserver/CommsCommon.py
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from struct import Struct
from enum import Enum, IntEnum, auto, unique
from dataclasses import dataclass, asdict, field, fields
......@@ -279,7 +302,7 @@ class PayloadFormat():
@dataclass
class DataFormat(PayloadFormat):
# subclass dataformat
_dataStruct = Struct("<BIBBHfHffffHfHHfffffffff")
_dataStruct = Struct("<BIBBHfHffffHfHHffffffffff")
payload_type: PAYLOAD_TYPE = PAYLOAD_TYPE.DATA
# subclass member variables
fsm_state: BL_STATES = BL_STATES.IDLE
......@@ -296,7 +319,8 @@ class DataFormat(PayloadFormat):
ambient_temperature: int = 0
airway_pressure: float = 0.0
flow: float = 0.0
volume: float = 0.0
flow_calc : float = 0.0
volume : float = 0.0
target_pressure : float = 0.0 ##
process_pressure: float = 0.0
valve_duty_cycle: float = 0.0
......@@ -330,6 +354,7 @@ class DataFormat(PayloadFormat):
self.ambient_temperature,
self.airway_pressure,
self.flow,
self.flow_calc,
self.volume,
self.target_pressure ,
self.process_pressure,
......
raspberry-dataserver/CommsControl.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# Communication protocol between rasp and arduino based on HDLC format
# author Peter Svihra <peter.svihra@cern.ch>
......
raspberry-dataserver/CommsDebug.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from CommsLLI import CommsLLI
from CommsCommon import *
import asyncio
......@@ -41,11 +64,12 @@ class Dependant(object):
# logging.info(f"Alarm: {payload.alarm_code} of priority: {payload.alarm_type}")
if payload.getType() == PAYLOAD_TYPE.DATA.value:
logging.info(f"payload received: {payload}")
#logging.info(f"payload received: {payload.timestamp} pc {payload.flow:3.6f} dc {payload.volume:3.6f} fsm {payload.fsm_state}")
#logging.info(f"payload received: {payload.pressure_buffer:3.6f} fsm {payload.fsm_state}")
#logging.info(f"Fsm state: {payload.fsm_state}")
fsm = payload.fsm_state
#logging.info(f"payload received: {payload}")
logging.info(f"payload received: {payload.timestamp} pc {payload.flow:3.6f} dc {payload.flow_calc:3.6f} fsm {payload.fsm_state}")
# #logging.info(f"payload received: {payload.timestamp} pc {payload.flow:3.6f} dc {payload.volume:3.6f} fsm {payload.fsm_state}")
# #logging.info(f"payload received: {payload.pressure_buffer:3.6f} fsm {payload.fsm_state}")
# #logging.info(f"Fsm state: {payload.fsm_state}")
# fsm = payload.fsm_state
#if payload.getType() == PAYLOAD_TYPE.IVT.value:
# logging.info(f"payload received: {payload} ")
#logging.info(f"IV: air {payload.air_in_current:.3f} o2 {payload.o2_in_current:.3f} purge {payload.purge_current:.3f} inhale {payload.inhale_current:.3f} exhale {payload.exhale_current:.3f} fsm {fsm} ")
......@@ -54,14 +78,16 @@ class Dependant(object):
# logging.info(f"payload received: inhale exhale ratio = {payload.inhale_exhale_ratio} ")
#if payload.getType() == PAYLOAD_TYPE.CYCLE.value:
# logging.info(f"payload received: {payload} ")
if payload.getType() == PAYLOAD_TYPE.READBACK.value:
#logging.info(f"payload received: {payload} ")
logging.info(f" READBACK PID {payload.kp:3.6f} {payload.ki:3.6f} {payload.kd:3.6f} ")
if payload.getType() == PAYLOAD_TYPE.DEBUG.value:
#if payload.getType() == PAYLOAD_TYPE.LOOP_STATUS.value:
# logging.info(f"payload received: {payload} ")
#if payload.getType() == PAYLOAD_TYPE.READBACK.value:
# #logging.info(f"payload received: {payload} ")
# logging.info(f" READBACK PID {payload.kp:3.6f} {payload.ki:3.6f} {payload.kd:3.6f} ")
#if payload.getType() == PAYLOAD_TYPE.DEBUG.value:
#logging.info(f" PID {payload.kp:3.6f} {payload.ki:3.6f} {payload.kd:3.6f} {payload.proportional:3.6f} {payload.integral:3.6f} {payload.derivative:3.6f} {payload.valve_duty_cycle:3.6f} {payload.target_pressure:3.6f} {payload.process_pressure:3.6f} fsm {fsm}")
logging.info(f" DEBUG PID {payload.kp:3.6f} {payload.ki:3.6f} {payload.kd:3.6f} ")
if payload.getType() == PAYLOAD_TYPE.LOGMSG.value:
logging.info(f"LOGMSG {payload.timestamp}:{payload.message} {fsm}")
# logging.info(f" DEBUG PID {payload.kp:3.6f} {payload.ki:3.6f} {payload.kd:3.6f} ")
#if payload.getType() == PAYLOAD_TYPE.LOGMSG.value:
# logging.info(f"LOGMSG {payload.timestamp}:{payload.message} {fsm}")
#if payload.getType() == PAYLOAD_TYPE.TARGET.value:
# logging.info(f"LOGMSG {payload} {fsm}")
#if hasattr(payload, 'ventilation_mode'):
......@@ -93,7 +119,7 @@ async def commsDebug():
send_cmd(cmd_type="SET_PID", cmd_code="KP", param=0.001)#
send_cmd(cmd_type="SET_PID", cmd_code="KI", param=0.0005)#5)# 0.0005
send_cmd(cmd_type="SET_PID", cmd_code="KD", param=0.001)#01)# 0.001
send_cmd(cmd_type="SET_TARGET_CURRENT", cmd_code="PID_GAIN", param=2)
#send_cmd(cmd_type="SET_TARGET_CURRENT", cmd_code="PID_GAIN", param=2)
#send_cmd(cmd_type="GET_TARGETS", cmd_code="TEST", param=0)
send_cmd(cmd_type="SET_PID", cmd_code="NSTEPS", param=3) #
......@@ -111,8 +137,8 @@ async def commsDebug():
send_cmd(cmd_type="SET_VALVE", cmd_code="INHALE_OPEN_MIN", param=0.53)
### NOTE : THESE ARE FOR TESTING ONLY, AS THEY OVERRIDE THE VALUES SET BY THE VENTILATION MODE
send_cmd(cmd_type="SET_TARGET_CURRENT", cmd_code="INHALE_TRIGGER_ENABLE", param=1)
send_cmd(cmd_type="SET_TARGET_CURRENT", cmd_code="EXHALE_TRIGGER_ENABLE", param=1)
send_cmd(cmd_type="SET_TARGET_CURRENT", cmd_code="INHALE_TRIGGER_ENABLE", param=0)
send_cmd(cmd_type="SET_TARGET_CURRENT", cmd_code="EXHALE_TRIGGER_ENABLE", param=0)
send_cmd(cmd_type="SET_TARGET_CURRENT", cmd_code="VOLUME_TRIGGER_ENABLE", param=0)
send_cmd(cmd_type="SET_VALVE", cmd_code="AIR_IN_ENABLE", param=1)
......
raspberry-dataserver/CommsDebug2.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from CommsLLI import CommsLLI
from CommsCommon import *
import asyncio
......@@ -42,23 +65,25 @@ class Dependant(object):
if payload.getType() == PAYLOAD_TYPE.DATA.value:
#logging.info(f"payload received: {payload}")
#logging.info(f"payload received: {payload.timestamp} p {payload.pressure_patient:3.2f} f {payload.flow:3.3f} base {payload.volume:3.3f} d {payload.flow - payload.volume:3.3f} {payload.fsm_state}")
#logging.info(f"payload received: {payload.pressure_o2_regulated}")
logging.info(f"payload received: {payload.timestamp} p {payload.pressure_patient:3.2f} dp {payload.pressure_diff_patient:3.3f} f {payload.flow:3.3f} base {payload.volume:3.3f} d {payload.flow - payload.volume:3.3f} {payload.fsm_state}")
#logging.info(f"Fsm state: {payload.fsm_state}")
fsm = payload.fsm_state
#fsm = payload.fsm_state
#if payload.getType() == PAYLOAD_TYPE.IVT.value:
# logging.info(f"payload received: {payload} ")
#logging.info(f"payload received: {payload} ")
#logging.info(f"IV: air {payload.air_in_current:.3f} o2 {payload.o2_in_current:.3f} purge {payload.purge_current:.3f} inhale {payload.inhale_current:.3f} exhale {payload.exhale_current:.3f} fsm {fsm} ")
#logging.info(f"payload received: {payload}")
#if hasattr(payload, 'inhale_exhale_ratio'):
# logging.info(f"payload received: inhale exhale ratio = {payload.inhale_exhale_ratio} ")
#if payload.getType() == PAYLOAD_TYPE.CYCLE.value:
# logging.info(f"payload received: {payload} ")
#logging.info(f"payload received: {payload} ")
#logging.info(f"payload received: {payload.fiO2_percent:3.9f} ")
#if payload.getType() == PAYLOAD_TYPE.READBACK.value:
# logging.info(f"payload received: {payload} {fsm}")
#if payload.getType() == PAYLOAD_TYPE.DEBUG.value:
# logging.info(f" PID {payload.kp:3.6f} {payload.ki:3.6f} {payload.kd:3.6f} {payload.proportional:3.6f} {payload.integral:3.6f} {payload.derivative:3.6f} {payload.valve_duty_cycle:3.6f} {payload.target_pressure:3.6f} {payload.process_pressure:3.6f} fsm {fsm}")
if payload.getType() == PAYLOAD_TYPE.PERSONAL.value:
logging.info(f"payload received: {payload} ")
#if payload.getType() == PAYLOAD_TYPE.PERSONAL.value:
# logging.info(f"payload received: {payload} ")
#if payload.getType() == PAYLOAD_TYPE.LOGMSG.value:
# logging.info(f"LOGMSG {payload.timestamp}:{payload.message} {fsm}")
#if payload.getType() == PAYLOAD_TYPE.TARGET.value:
......@@ -102,7 +127,7 @@ async def commsDebug():
#await asyncio.sleep(10)
#print('send personal info')
send_personal("Jessica Jones", 'abc1234', 29, 'F', 175, 58)
#send_personal("Jessica Jones", 'abc1234', 29, 'F', 175, 58)
#send_cmd(cmd_type="GET_THRESHOLD_MAX", cmd_code="APNEA")
#await asyncio.sleep(1)
......
raspberry-dataserver/CommsFormat.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# Communication protocol based on HDLC format
# author Peter Svihra <peter.svihra@cern.ch>
......
raspberry-dataserver/CommsLLI.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import asyncio
import serial_asyncio
......
raspberry-dataserver/LabPlots.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from CommsLLI import CommsLLI
from CommsCommon import *
import asyncio
......
raspberry-dataserver/PID_debug_plots.py
View file @ 459c7229
#!/usr/bin/python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import sys
import re
import queue
......
raspberry-dataserver/flow_plots.py
View file @ 459c7229
#!/usr/bin/python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import sys
import re
import queue
......
raspberry-dataserver/get_pid.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from CommsLLI import CommsLLI
from CommsCommon import *
import asyncio
......
raspberry-dataserver/hevclient.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# client side for the data server to manage comms between UIs and LLI
#
# Author: Dónal Murray <donal.murray@cern.ch>
......
raspberry-dataserver/hevfromtxt.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# simple txt filereader frontend for HEVserver
# currently dedicated to very specific file format matching victor's sample.txt
......
raspberry-dataserver/hevgpio.py deleted 120000 → 0
View file @ 302a5fef
../battery/hevgpio.py
\ No newline at end of file
raspberry-dataserver/hevgpio.py 0 → 100644
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import json
class gpio:
DUMMY = True
IN = 0
OUT = 0
SPI = 0
I2C = 0
HARD_PWM = 0
SERIAL = 0
UNKNOWN = 0
PUD_DOWN = 0
BCM = 0
@staticmethod
def setmode(mode):
pass
@staticmethod
def setup(pin, mode, pull_up_down):
pass
def __init__(self):
self._dumpfile = "share/battdump.dict"
self._iter = self.generator()
self._fileline = self.update()
self._pins = {5: "bat",
6: "ok",
12: "alarm",
13: "rdy2buf",
19: "bat85",
7: "prob_elec"}
def update(self):
return json.loads(next(self._iter).replace("'",'"').replace("True","true").replace("False","false"))
def generator(self):
while True:
with open(self._dumpfile, 'r') as f:
try:
for line in f:
yield line
except StopIteration:
pass
def input(self, pin):
currline = self._fileline
if pin == 7:
# get next line from file
self._fileline = self.update()
return currline[self._pins[pin]]
raspberry-dataserver/hevserver.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# data server to manage comms between UIs and LLI
#
# Author: Dónal Murray <donal.murray@cern.ch>
......
raspberry-dataserver/hevtestdata.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# simple txt filereader frontend for HEVserver
# currently dedicated to very specific file format matching victor's sample.txt
......
raspberry-dataserver/lazy_plots.py
View file @ 459c7229
#!/usr/bin/python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
import sys
import re
import queue
......
raspberry-dataserver/set_pid.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from CommsLLI import CommsLLI
from CommsCommon import *
import asyncio
......
raspberry-dataserver/share/battdump.dict
View file @ 459c7229
......@@ -177,30 +177,3 @@
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
{'version': 0, 'timestamp': 0, 'payload_type': 'BATTERY', 'bat': 0, 'ok': 1, 'alarm': 0, 'rdy2buf': 1, 'bat85': 1, 'prob_elec': 0, 'dummy': False}
raspberry-dataserver/stop.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
from CommsLLI import CommsLLI
from CommsCommon import *
import asyncio
......
raspberry-dataserver/svpi.py
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# Front end generator for HEV raspberry pi data server
# author Dónal Murray <donal.murray@cern.ch>
......
utils/ard_upgrade
View file @ 459c7229
#!/usr/bin/env python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# streamline arduino firmware upgrades for hev
#
# On first installation run:
......
utils/enumcheck.sh
View file @ 459c7229
#!/usr/bin/env bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
set -euo pipefail
for enum in CMD_TYPE CMD_GENERAL CMD_SET_TIMEOUT VENTILATION_MODE ALARM_TYPE ALARM_CODES; do
......
utils/hevcheck.sh
View file @ 459c7229
#!/bin/sh
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# called from the udev rule at /etc/udev/rules.d/88-hev.rules when arduino connected
echo "Arduino connected at $(date)" >> /tmp/hevcheck.log
utils/insert_header_cpp.sh 0 → 100755
View file @ 459c7229
#!/bin/bash
sed -i "1{
r licence_header_cpp.txt
h;d
};2{H;g;}" $1
utils/insert_header_py.sh 0 → 100755
View file @ 459c7229
#!/bin/bash
sed -i "2{
r licence_header_py.txt
h;d
};3{H;g;}" $1
utils/licence_header_cpp.txt 0 → 100644
View file @ 459c7229
// © Copyright CERN, Riga Technical University and University of Liverpool 2020.
// All rights not expressly granted are reserved.
//
// This file is part of hev-sw.
//
// hev-sw is free software: you can redistribute it and/or modify it under
// the terms of the GNU General Public Licence as published by the Free
// Software Foundation, either version 3 of the Licence, or (at your option)
// any later version.
//
// hev-sw is distributed in the hope that it will be useful, but WITHOUT
// ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
// for more details.
//
// You should have received a copy of the GNU General Public License along
// with hev-sw. If not, see <http://www.gnu.org/licenses/>.
//
// The authors would like to acknowledge the much appreciated support
// of all those involved with the High Energy Ventilator project
// (https://hev.web.cern.ch/).
utils/licence_header_py.txt 0 → 100644
View file @ 459c7229
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
utils/serial_over_ssh.sh
View file @ 459c7229
#!/bin/bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
ssh -fCo "ExitOnForwardFailure yes" -L 54333:localhost:54321 pi@nuliv "nc -l localhost 54321 </dev/ttyACM0 >/dev/ttyACM0" && socat pty,link=$HOME/vmodem0,wait-slave tcp:localhost:54333 &
echo "Connect to \$HOME/vmodem0 for serial connection"
utils/serialdump.py
View file @ 459c7229
#!/usr/bin/python3
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
# Karol's dumb serial dumper
import serial
......
utils/structcheck.sh
View file @ 459c7229
#!/usr/bin/env bash
# © Copyright CERN, Riga Technical University and University of Liverpool 2020.
# All rights not expressly granted are reserved.
#
# This file is part of hev-sw.
#
# hev-sw is free software: you can redistribute it and/or modify it under
# the terms of the GNU General Public Licence as published by the Free
# Software Foundation, either version 3 of the Licence, or (at your option)
# any later version.
#
# hev-sw is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public Licence
# for more details.
#
# You should have received a copy of the GNU General Public License along
# with hev-sw. If not, see <http://www.gnu.org/licenses/>.
#
# The authors would like to acknowledge the much appreciated support
# of all those involved with the High Energy Ventilator project
# (https://hev.web.cern.ch/).
set -euo pipefail
for struct in fast_data_format readback_data_format cycle_data_format cmd_format alarm_format; do
......
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