Several changes to top-level file
- connecting WRPC's SPI outputs to the conv-common-gw flash outputs - the flash outputs are multiplexed between the WRPC and the multiboot logic (MultiBoot logic has priority) - re-generating the code for local PPS generation when the hardware one-wire master is generated (gen_with_therm) - the PPS output is obtained from the WRPC when WR is present - connecting the WRPC's timing outputs to the time-tagging core
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